Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2170 |
Symbol | |
ID | 5109510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2397391 |
End bp | 2397858 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503414 |
Product | hypothetical protein |
Protein accession | YP_001187662 |
Protein GI | 146307197 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000841913 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00518945 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACCCGT TCGATGCCGA TAAGCCCCCG AAACTTGCCA TGCTGCTGGG TTATGCTGGC TTGGTGCCTT TCGTGGGGGG CGCACTGGGC ATCTGGGTGA TTCCACTGGG CTGGCGGCCG TTCGTGCTGA ACGCTCTGCT GGATTTCGCT GCAGTGATTC TCGCCTTCAT GGGCGCCATT CACTGGGGCC TGGCGATGCG TGCGGAGGAG ACCGACGAGA ACGCTCAGCT GCAGCTTGGC CTGTCGGTGA TCCCCCCGAT GCTCGGCTGG GCGGCGCTGG CCAGCGGCTT GCCCATGGCC TTCACTTTGC CGATCTTCCT CTTCGCCTTC ATCGGCCTCT ATCTGGCCGA CATGCATGCG GTGCGGGTCG GGCTGGCACC GCAGTGGTAT CCGGCGTTGC GCACACCCCT GACGCTGGTG GTCTGCGGCA GTCTGCTACT GGCCTGGGCC AGTGTGCTGA TTCGCTGA
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Protein sequence | MHPFDADKPP KLAMLLGYAG LVPFVGGALG IWVIPLGWRP FVLNALLDFA AVILAFMGAI HWGLAMRAEE TDENAQLQLG LSVIPPMLGW AALASGLPMA FTLPIFLFAF IGLYLADMHA VRVGLAPQWY PALRTPLTLV VCGSLLLAWA SVLIR
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