Gene Pmen_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2106 
Symbol 
ID5109840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2336070 
End bp2336384 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content65% 
IMG OID640503350 
Producthypothetical protein 
Protein accessionYP_001187599 
Protein GI146307134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.317583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00244173 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGGACG TACTGCAGTT GAAACACCGG GTGAACCGCA TGCCGCTGGA GCGGGTGCGC 
GAGATGGTCG AGGAGCTGCA GCTCGAGGGC ATCGTCACCG AGAGCCGCAC CCCCTTCAAT
CGTCAGCACT TCAATACCTG CTTCGCCGAG ATCGAGGCCC TGCTGCAGCG CGCCGGCTAC
CACCGCCAGC TGGACGTGGT CGGCTACCAG GGGCTGGCCT ATGCATTGTT CGATCCGGCC
CGCTGGGAAG CCGTCGAAGT GCTGCGCTGG CTGCGCGATT TCGTCGAGGA GGCGCGCGTT
CAACCGGCTT CCTGA
 
Protein sequence
MLDVLQLKHR VNRMPLERVR EMVEELQLEG IVTESRTPFN RQHFNTCFAE IEALLQRAGY 
HRQLDVVGYQ GLAYALFDPA RWEAVEVLRW LRDFVEEARV QPAS