Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2094 |
Symbol | |
ID | 5109828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2319795 |
End bp | 2322512 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640503338 |
Product | assimilatory nitrate reductase (NADH) alpha subunit apoprotein |
Protein accession | YP_001187587 |
Protein GI | 146307122 |
COG category | [R] General function prediction only |
COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0428437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0964557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACCC AGAGCCAAAT CACCGCTTCA ACCTGCTGCT ACTGCGGCGT GGGCTGCGGC GTGCTGATCG AGCACGACGG CGAGAAGATC CTCGGCGTCG CCGGCGACCC CAGCCACCCG GCCAACTTCG GCAAGCTGTG CAGCAAGGGC TCGACCCTGC ACCTGACCGG CGACCTCGAC GCCCGCGCCC TCCATCCCGA GCTGCGTCTG GGCAAGGGCC TGGCCCGTTC GCGCACCGAC TGGGACAGCG CCCTGGATCA CGCCGCGGCG GTGTTCGCCG AGACCATCCG CGAGCACGGC CCGGACAGCG TGGCCTTTTA TATCTCCGGC CAGTTGCTGA CCGAGGACTA CTACGCCTTC AACAAGCTGG CCAGAGCATT GGTGGGAACC AACAATATCG ACAGCAATTC GCGCCTGTGC ATGAGCTCGG CGGTGGTCGG CTACAAGCGC AGCCTCGGCG CCGATGCCCC CCCCTGCAGT TACGAGGACA TCGAGCAGAG CGACTGCCTG CTGATCGCCG GCTCCAACAT GGCCTACGCC CATCCGGTAC TGTTCCGCCG CCTGGAAGAA GCCAAGGCCC GCCGTCCGGA GATGCAGATC ATCGTCGTCG ATCCGCGGCG TACCGACACC TGCGAGCTGG CCGACCTGCA CCTGGCGATC CTGCCCGGCA CCGACGTCGC GCTGTTTCAC GGCATCCTGC ATATCCTGCT GTGGGAAGGC TGGGTCGACC GCCGCTACAT CGACGCCCAC ACCGAAGGCT TCGCGGCGCT GAAGAACCTG GTGCGCGACT ACAGCCCGGC GGCCACTGCC GATATCTGCG GCATCAGCCT GGACGCCCTG CAGCGCTGCG CCGAGTTGAT CGGCCGTGCG CCCTCCTTCC TTTCGCTGTG GTGCATGGGG CTGAACCAGT CCAGCGCAGG CAGTGCGAAG AACAGCGCGC TGATCAACCT GCACCTGGCC ACCGGGCAGA TCGGCAAGCC CGGCGCCGGC CCCTTCTCGC TGACCGGCCA GCCCAATGCC ATGGGCGGTC GCGAGACCGG CAGCCTGAGC AACCTGCTGC CGGGCCACCG CGAGGCCGGC AACGCCGAGC ACCGCGCCGA AGTCGCCGCC TACTGGGGCG TCGATGCCCT GCCGGAGACG CCCGGTCTGT CCGCCATCGA GCTGTTCGAT GCGGTGCACG ACGGGCGCAT CAAGGCGCTG TGGATCGCCT GCACCAACCC GGCGCAGTCC CTGCCGAACC AGAACAAGGT GCACGAGGCC CTGGCCGCCT GCCCCTTCGT CGTGGTGCAG GAAGCCTTCT TCACCACCGA GACCTGCCGC TACGCCGACC TGCTGCTGCC CGCCGCCAGC TGGGGCGAGA AGGAAGGCAC GGTGACCAAC TCCGAACGAC GCGTCAGCCA TGTGCGCCGC GCCGTGCCAG CGCCCGCAGA GGCGCGGTCC GATTGGTCGA TCACCTGCGA CTTCGCCCGT CGCCTGGAAA CTCTGCTCCG CCCCGGCCTG CCCAGCCTGT TCGACTTCAC CAGCAGCGAG GCGCTGTTCG AGGAATACAA GCACCTGACC GCCGAGCGCG ATCTCGACCT CTCGGGGCTG AGCTACGCGC TGCTCGATGA CCAAGGTCCC CAGCAATGGC CGTTTGCGCC GGGCGCACGC CAGGGTACCG CACGGCTCTA TGCCGACGGC CTCTTCCCCA CCGCCAGCGG ACGCGCGCAG TTCCATGCCG ACCCGTACCG CGCGCCGAAG GAAAAGCGTG AGGCGCGCTA TTCGCTCACC CTCAATACCG GCCGCCTGCG CGACCAGTGG CACGGCATGA GCCGCACCGG CACCGCGGCG CGCCTGTTCG GCCATGTCGA GGCCGCCGTG CTCGGTCTGC ACCCGGACGA GCTGCGTCGC CGTCGTCTGC AGGACGGCGA TCTGGTCAAG TTGCGCAGCC GCCGCGGCAG TCTGATCCTG CCGGTGCAGG CGGACGAGTC GGTGCGCCCA GGCCAGGCCT GGCTGCCGAT GCACTGGGGC GACCGCTTCC TCAAGGGCTT GGGCACCAAC GTGCTGACCC AACCGGCCTT CGACCCGCTA TCCAAGCAGC CGGAGCTCAA GCATGCCGGC GTCGAGGTGG ATAAGGTCGA GCTGCCCTGG CAGCTGTTCG CCCTGGTCGA GGGCGAGGTG CAGAGCCGCT TCGAGGCCCT GCGTCCGCTG TTCGAGGAGT TCGCCTACGC CAGCCTCACC CCCACCGGCC GCGAGCGCCC CGCCCTGCTG ATCCGCGCCG CCAGCGCCGT GGCGCCGCAA CCCGAACTGC TGGCACAGAT CGACCGCCTG CTGCGCCTGA ACCAGGGCCC GGTGCTGGCC TACGACGACC CGCGCCGCGC GGTGGGCAAG CGCGTGCGCA TTGAGGATGG CCGCATCGTC AGTACCCGTC TGGCCGGCGA AACGGCCGCC AGCGAATGGC TCAGAAGCCT GTGGCTTGAC GGCCAGGCCG ATGCCGACCT GCGCCGCTGG CTGCTCGCCC CGGTCTCCGC GCCGCCGGGC AATGCAACCG CCACCACCCG CGGCAAGACC CTGTGCAATT GCCTGAACGT CAGCGAAAGC GCGGTGTGCG CCGGCATCGA GCGTGGCCTG GATCTGAACG GCCTCAAGCA GGAACTCAAA TGCGGCACCA GTTGTGGCTC CTGCGTACCC GAAATCAAGC GATTGCTGGC TCAACAGCCG ATGGCGACAC AAGCGTAG
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Protein sequence | MPTQSQITAS TCCYCGVGCG VLIEHDGEKI LGVAGDPSHP ANFGKLCSKG STLHLTGDLD ARALHPELRL GKGLARSRTD WDSALDHAAA VFAETIREHG PDSVAFYISG QLLTEDYYAF NKLARALVGT NNIDSNSRLC MSSAVVGYKR SLGADAPPCS YEDIEQSDCL LIAGSNMAYA HPVLFRRLEE AKARRPEMQI IVVDPRRTDT CELADLHLAI LPGTDVALFH GILHILLWEG WVDRRYIDAH TEGFAALKNL VRDYSPAATA DICGISLDAL QRCAELIGRA PSFLSLWCMG LNQSSAGSAK NSALINLHLA TGQIGKPGAG PFSLTGQPNA MGGRETGSLS NLLPGHREAG NAEHRAEVAA YWGVDALPET PGLSAIELFD AVHDGRIKAL WIACTNPAQS LPNQNKVHEA LAACPFVVVQ EAFFTTETCR YADLLLPAAS WGEKEGTVTN SERRVSHVRR AVPAPAEARS DWSITCDFAR RLETLLRPGL PSLFDFTSSE ALFEEYKHLT AERDLDLSGL SYALLDDQGP QQWPFAPGAR QGTARLYADG LFPTASGRAQ FHADPYRAPK EKREARYSLT LNTGRLRDQW HGMSRTGTAA RLFGHVEAAV LGLHPDELRR RRLQDGDLVK LRSRRGSLIL PVQADESVRP GQAWLPMHWG DRFLKGLGTN VLTQPAFDPL SKQPELKHAG VEVDKVELPW QLFALVEGEV QSRFEALRPL FEEFAYASLT PTGRERPALL IRAASAVAPQ PELLAQIDRL LRLNQGPVLA YDDPRRAVGK RVRIEDGRIV STRLAGETAA SEWLRSLWLD GQADADLRRW LLAPVSAPPG NATATTRGKT LCNCLNVSES AVCAGIERGL DLNGLKQELK CGTSCGSCVP EIKRLLAQQP MATQA
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