| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2090 |
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| Symbol | |
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| ID | 5109824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2316282 |
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| End bp | 2317106 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503334 |
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| Product | TM helix repeat-containing protein |
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| Protein accession | YP_001187583 |
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| Protein GI | 146307118 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00247017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.258692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG ATCCCTGGAC CCAAAGCCTG ATCTCCGCGA TGACTGCACT GTGGACCAAG
GTTGCCGGCT TCATCCCCAA TCTGTTCGTC GCCCTGGTGC TGGTGCTGCT GGGCTTCGTC
GTGGCCAAAC TGCTCGACAC CCTGCTGTCC AAGCTACTCG GCAAGGTAGG GCTGGACCGT
CTGATGATGG GTACCGGGCT GACCAAGCTG TTGGCCCGTG TGGGGATCCA GGCGTCGGTT
TCGACCCTGA TCGGCAAGAT CGTCTACTGG TTCGTGCTGC TGATCTTCCT GGTTTCGGCT
GCCGAATCGC TTGGCCTGCA ACGCGTATCC GCCACCCTCG ACGTGCTGGC GCTGTACCTG
CCCAAGGTCT TCGGTGCGGC CCTGGTGCTG CTGGCCGGCG TACTGCTGGC GCAACTGGTC
AGCAGCCTGG TGCGTGGCGC CGCCGAAGGC GTCGGCCTGG AATATGCCCA TGGTCTTGGC
CGTGTGGCCC AAGGCCTGGT GATCATCATC AGCATCTCGG TGGCCATCGG CCAGCTCGAG
GTCAAGACCG ATCTGCTCAA CAACGTCATC GCCATTGTCC TGATTTCGGT CGGTCTGGCG
GTCGCGCTGG CCCTGGGGCT GGGCAGTCGT GACATCGCCA GCCAGATTCT GGCCGGCATC
TACGTGCGCG AGTTGTACCA GGTCGGGCAA CAGGTGCAGG TCGGCGAGGT CGAAGGCCAG
ATCGAAGAGA TCGGCACGGT GAAAACCATT CTGTTGACCG ATGCCGGCGA GCTGGTTTCG
GTGGCCAATC GGGTGATGCT CGAACAACGC GTGAACAGTC GCTGA
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| Protein sequence | MELDPWTQSL ISAMTALWTK VAGFIPNLFV ALVLVLLGFV VAKLLDTLLS KLLGKVGLDR
LMMGTGLTKL LARVGIQASV STLIGKIVYW FVLLIFLVSA AESLGLQRVS ATLDVLALYL
PKVFGAALVL LAGVLLAQLV SSLVRGAAEG VGLEYAHGLG RVAQGLVIII SISVAIGQLE
VKTDLLNNVI AIVLISVGLA VALALGLGSR DIASQILAGI YVRELYQVGQ QVQVGEVEGQ
IEEIGTVKTI LLTDAGELVS VANRVMLEQR VNSR
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