| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2051 |
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| Symbol | clpX |
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| ID | 5109785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2266946 |
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| End bp | 2268226 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503295 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001187544 |
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| Protein GI | 146307079 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0706699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.305384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CACGTAACGG TGAGGACAAC GGCAAACTGC TTTATTGCTC CTTCTGCGGC
AAAAGCCAGC ACGAAGTGCG CAAGTTGATC GCCGGTCCTT CCGTCTTCAT CTGCGACGAA
TGCGTCGACC TGTGCAATGA CATCATCCGC GAGGAGGTGC AGGAAGCCCA GGCCGAGAGC
AGCGCGCACA AACTCCCGGC ACCCAAGGAA ATCAGCGCGA TCCTCGATCA ATATGTGATC
GGTCAGGAAC GCGCTAAAAA GGTGCTTTCG GTAGCGGTGT ACAACCACTA CAAACGTCTC
AACCAGCGCG ACAAGAAAGA CGATGTCGAA CTGGGCAAGA GCAATATTCT GCTGATCGGT
CCTACGGGGT CGGGCAAGAC ACTGCTGGCC GAAACGCTGG CGCGCCTGCT CAACGTGCCG
TTCACCATCG CCGACGCCAC CACCCTGACC GAGGCCGGTT ACGTGGGTGA GGACGTCGAG
AACATCATTC AAAAGCTGTT GCAGAAGTGC GACTACGATG TCGAGAAGGC CCAGATGGGC
ATCGTGTACA TCGACGAAAT CGACAAGATC TCGCGCAAGT CGGACAACCC GTCCATCACC
CGTGACGTGT CGGGCGAGGG CGTGCAGCAG GCGCTGCTCA AGCTGATCGA GGGTACGGTA
GCCTCGGTTC CGCCGCAGGG CGGGCGCAAG CATCCGCAGC AGGAGTTCCT GCAGGTCGAT
ACGCGCAACA TCCTGTTCAT CTGTGGCGGC GCGTTCGCCG GCCTTGAGAA GGTTATCCAG
GCTCGCTCCA CCAAGGGCGG CATCGGCTTC GGTGCGGAAG TGCGCAGCAA GCAGGAAGGC
AAGAAGATCG GCGAGTCCCT GCGTGAGGTC GAGCCGGACG ATCTGGTCAA GTTCGGTTTG
ATTCCCGAGT TCGTCGGTCG TCTGCCGGTC ATCGCGACCC TGGAGGAGCT GGACGAAGCG
GCTCTGGTGC AGATCCTGAC CGAGCCTAAG AACGCGCTGA CTAAGCAGTA CGCCAAGCTC
TTCGAGATGG AAGGCGTCGA CCTGGAGTTC CGCTCCGATG CGCTGAAGTC CGTTGCGCAG
AGAGCGCTGG AGCGCAAGAC CGGGGCCCGC GGCCTGCGTT CGATCCTCGA AGGCATCCTG
CTCGATACCA TGTACGAGAT CCCGTCCCAG CAGGACGTGA GCAAGGTGGT GATCGACGAG
AGCGTCATCG ACGGTTCCTC CAAGCCGCTG CTGATCTACG AGAACAGCGA GCCTCAGGCC
AAGGCCGCGC CAGACGCGTA G
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| Protein sequence | MTDTRNGEDN GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES
SAHKLPAPKE ISAILDQYVI GQERAKKVLS VAVYNHYKRL NQRDKKDDVE LGKSNILLIG
PTGSGKTLLA ETLARLLNVP FTIADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQMG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD
TRNILFICGG AFAGLEKVIQ ARSTKGGIGF GAEVRSKQEG KKIGESLREV EPDDLVKFGL
IPEFVGRLPV IATLEELDEA ALVQILTEPK NALTKQYAKL FEMEGVDLEF RSDALKSVAQ
RALERKTGAR GLRSILEGIL LDTMYEIPSQ QDVSKVVIDE SVIDGSSKPL LIYENSEPQA
KAAPDA
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