| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2048 |
|---|
| Symbol | |
|---|
| ID | 5109782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2263211 |
|---|
| End bp | 2264065 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640503289 |
|---|
| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_001187541 |
|---|
| Protein GI | 146307076 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.629007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.184517 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC AACTGATCGA CGGCAAGGCG ATCGCCGCCA GCCTCCGCCA GCAGATTGCC
CAACGTGTCG CCGAACGCCG CCAGCAAGGC CTTCGTGCGC CAGGCCTGGC CGTGATCCTG
GTCGGTACCG ATCCCGCCTC CCAGGTCTAT GTGTCACATA AACGCAAGGA TTGCGAAGAA
GTCGGCTTCC TCTCCCGCGC CTACGACCTG CCGGCCGAGA CCAGCCAGGC CGATCTGCTC
GCCTTGATCG ACGAGCTCAA CGAAGACCCG ACCATCGACG GCATCCTGGT GCAGCTGCCG
CTGCCCGAGC ATCTGGACTC CTCCCTGCTG CTCGAGCGCA TCCGTCCGGA TAAAGATGTG
GACGGCTTCC ACCCCTACAA TATCGGCCGC CTGGCCCAGC GCATGCCGCT GCTGCGCCCG
TGCACACCGA AGGGCATCAT GACCCTGCTG GAAAGCACCG GCGCCGATCT CTACGGCATG
CATGCCGTAG TCGTGGGCGC CTCCAATATC GTCGGCCGGC CGATGGCCAT GGAGCTGCTG
CTGGCCGGCT GCACCGTGAC CGTCACCCAC CGTTTCACCA AGGATCTGGC GGGCCATGTC
GGCCAGGCCG ACATCGTCGT GGTCGCGGCC GGCAAGCCGG GCCTGGTCAA GGGCGAGTGG
ATCAAGGAAG GCGCCATCGT CATCGACGTC GGCATCAACC GCCAGGAAGA CGGCAAGCTG
GTCGGCGACG TGGTCTACGA GACCGCCCTG CCCCGCGCCG GCTGGATCAC CCCGGTGCCG
GGCGGCGTCG GCCCGATGAC CCGCGCAGGC CTGCTGGAAA ACACCCTGCA CGCAGCCGAA
CACCTGCATA AATAA
|
|---|
| Protein sequence | MTAQLIDGKA IAASLRQQIA QRVAERRQQG LRAPGLAVIL VGTDPASQVY VSHKRKDCEE
VGFLSRAYDL PAETSQADLL ALIDELNEDP TIDGILVQLP LPEHLDSSLL LERIRPDKDV
DGFHPYNIGR LAQRMPLLRP CTPKGIMTLL ESTGADLYGM HAVVVGASNI VGRPMAMELL
LAGCTVTVTH RFTKDLAGHV GQADIVVVAA GKPGLVKGEW IKEGAIVIDV GINRQEDGKL
VGDVVYETAL PRAGWITPVP GGVGPMTRAG LLENTLHAAE HLHK
|
|---|
| |