Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2039 |
Symbol | |
ID | 5109773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2253658 |
End bp | 2254095 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503280 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001187532 |
Protein GI | 146307067 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.480764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.558444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATG AAATCGACCA GACCCTGATC GCCGCCCTGA TGGAAGACTC GCGGCGCTCC CTGAAGGCCC TGGCGCAGAT CAGTGGCCTG TCCTCACCCA GCGTGGCCGA GCGCCTGCGG CGTCTGGAAG AACGCGGCGT GCTCAAGGGT TACAGAGTGG AAATCGATCC AAGCCACTTC GGCTATCAGC TGCAGGCCAT CGTTCGCGTG CGTCCGCTGC CCGGCAAGCT GCACGAGGTG GAACGGCTGA TCCAGGCCAC GCCCGAGTTC ACCGAATGCG ACAAGGTCAC CGGCGAGGAC TGCTTCATCG CCCGTCTGCA CGTGCGCTCG ATGGAGCAAC TGGACGAGGT GCTCGACCGC ATCAACGGCC ATGCCGAAAC CAACACCGCC ATCGTCAAGA AGACCTCGGT GCCCCGCCGC CTGCCCCCGA TGAACTGA
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Protein sequence | MTDEIDQTLI AALMEDSRRS LKALAQISGL SSPSVAERLR RLEERGVLKG YRVEIDPSHF GYQLQAIVRV RPLPGKLHEV ERLIQATPEF TECDKVTGED CFIARLHVRS MEQLDEVLDR INGHAETNTA IVKKTSVPRR LPPMN
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