Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2037 |
Symbol | |
ID | 5109771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2251264 |
End bp | 2252391 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640503278 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001187530 |
Protein GI | 146307065 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.666233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCA ACGAAGAACA ACTACTGATC CGCGACATGG CCCGCCAGTT CGCCCAGGAA CGGCTCAAGC CCTTCGCCGC CGACTGGGAC CGCGAGCATC GCTTCCCAGC CGAGGCCATT GCCGAGATGG GCCAGCTGGG CTTTATGGGC ATGCTGGTGC CGCAGCAATG GGGCGGCGCC GAGACCGGCC ACCTGGCCTA CGCCATGGCC CTGGAAGAGG TGGCGGCGGG TGATGGTGCC TGCTCCACCA TCATGAGCGT GCACAACTCG GTGGGCTGCA TGCCGATCCT GAAATACGGC AGCGAGGCGC AGAAACAGCG CTTTCTCCGC CCGCTGGCCG AAGGCAGCAT GCTCGGCGCC TTCGCCCTGA CCGAACCGCA GGCCGGCTCC GATGCCAGCG ACCTGCGCAC CCGCGCGCGG CGCGACGGCG GGCACTACGT GCTGAGCGGC GCCAAGCAGT TCATCACCTC CGGCAGCCAC GCCGGCATGG TCATCGTCTT CGCCGTCACC GACCCAGGGG CCGGCAAGAA GGGCATCAGC GCCTTTATCG TACCCACCGA CACGCCGGGG TTCTCGGTGG TGCGGGTGGA GGACAAGCTC GGCCAGCATG CCTCGGACAC CTGCCAGATC CAGCTCGACG AGGTGCGCAT CCCGGCCGAG CTGCGTCTGG GCGAGGAGGG CGAGGGTTAC CGCATCGCCC TGGCCAACCT GGAAGGCGGG CGCATCGGCA TCGCCGCGCA ATCGGTAGGT ATGGCCCGCG CCGCGTTCGA GGCGGCGCGC GACTACGCCC ACGAGCGGGT CACCTTCGGC AAGCCGATCA TCGAGCACCA GGCGGTGGCC TTCCGCCTGG CCGACATGGC CACCCAGATC GCCGTGGCGC GGCAGATGGT GCACCACGCC GCCAGCCTGC GCGAAGCCGG CCTGCCATGC CTGAGCGAGG CCTCGATGGC CAAGCTGTTC GCCTCGGAGA TGGCCGAGCG GGTGTGCTCC GCGGCGATCC AGACCCTGGG TGGTTACGGC TACCTCAAGG ACTTCCCGGT CGAGCGCATC TACCGCGACG TGCGTGTGTG CCAGATCTAC GAAGGCACCA GCGACGTGCA GCGGATGGTC ATCGCGCGCG GTTTGTAG
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Protein sequence | MLPNEEQLLI RDMARQFAQE RLKPFAADWD REHRFPAEAI AEMGQLGFMG MLVPQQWGGA ETGHLAYAMA LEEVAAGDGA CSTIMSVHNS VGCMPILKYG SEAQKQRFLR PLAEGSMLGA FALTEPQAGS DASDLRTRAR RDGGHYVLSG AKQFITSGSH AGMVIVFAVT DPGAGKKGIS AFIVPTDTPG FSVVRVEDKL GQHASDTCQI QLDEVRIPAE LRLGEEGEGY RIALANLEGG RIGIAAQSVG MARAAFEAAR DYAHERVTFG KPIIEHQAVA FRLADMATQI AVARQMVHHA ASLREAGLPC LSEASMAKLF ASEMAERVCS AAIQTLGGYG YLKDFPVERI YRDVRVCQIY EGTSDVQRMV IARGL
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