Gene Pmen_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2004 
Symbol 
ID5109895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2215954 
End bp2216355 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID640503245 
Producthypothetical protein 
Protein accessionYP_001187497 
Protein GI146307032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0261102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00480965 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATCGCT CATCGCTTGG TAAAGCCATG CTGGGGTTCG CTATCGTCGC CACCGTGGCG 
ATAGTGGCCA TCGCCGACGT ATTCAACGCG AGCCACTTGT TCAATCCGGA TTGGCCAGGC
CATGCGCGAT TCCATATCGG TATGCAGTTC ACCACCCTGG TGCTGGTCAG CCTGTTTTCC
CTGGCCGCGT TGAGGCGTGG CCAGGTGTGG GCCTCGGCAT TGGCGCCAGC AAGCTTCTGG
CCTGGCCTAT TCGTGGCCTA CCTCATCCCC GGCACCGATG TATATGCCAG CGAATCTCTG
CGCGAGCTGG GGATTCCGAT CAATCTGCTG CTGGCAGCAG TGCTACTTGG CATTACAGGG
CTGGGCGCGC TGCTGTATCA ATCCAGCGAG AGGCCAGCCT GA
 
Protein sequence
MNRSSLGKAM LGFAIVATVA IVAIADVFNA SHLFNPDWPG HARFHIGMQF TTLVLVSLFS 
LAALRRGQVW ASALAPASFW PGLFVAYLIP GTDVYASESL RELGIPINLL LAAVLLGITG
LGALLYQSSE RPA