Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2004 |
Symbol | |
ID | 5109895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2215954 |
End bp | 2216355 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640503245 |
Product | hypothetical protein |
Protein accession | YP_001187497 |
Protein GI | 146307032 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0261102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00480965 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATCGCT CATCGCTTGG TAAAGCCATG CTGGGGTTCG CTATCGTCGC CACCGTGGCG ATAGTGGCCA TCGCCGACGT ATTCAACGCG AGCCACTTGT TCAATCCGGA TTGGCCAGGC CATGCGCGAT TCCATATCGG TATGCAGTTC ACCACCCTGG TGCTGGTCAG CCTGTTTTCC CTGGCCGCGT TGAGGCGTGG CCAGGTGTGG GCCTCGGCAT TGGCGCCAGC AAGCTTCTGG CCTGGCCTAT TCGTGGCCTA CCTCATCCCC GGCACCGATG TATATGCCAG CGAATCTCTG CGCGAGCTGG GGATTCCGAT CAATCTGCTG CTGGCAGCAG TGCTACTTGG CATTACAGGG CTGGGCGCGC TGCTGTATCA ATCCAGCGAG AGGCCAGCCT GA
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Protein sequence | MNRSSLGKAM LGFAIVATVA IVAIADVFNA SHLFNPDWPG HARFHIGMQF TTLVLVSLFS LAALRRGQVW ASALAPASFW PGLFVAYLIP GTDVYASESL RELGIPINLL LAAVLLGITG LGALLYQSSE RPA
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