| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2003 |
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| Symbol | |
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| ID | 5109894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2213859 |
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| End bp | 2215445 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503244 |
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| Product | ABC transporter related |
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| Protein accession | YP_001187496 |
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| Protein GI | 146307031 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.118433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00762466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGATTTCCA CCGCTAACAT CACCATGCAG TTCGGCGCCA AGCCGCTGTT CGAGAACGTT
TCCGTCAAGT TCAACAACGG CAACCGCTAC GGTCTGATCG GCGCCAACGG CTGCGGCAAG
TCGACCTTCA TGAAGATTCT CGGCGGCGAT CTGGAGCCAT CGGGCGGCCA GGTGATGCTC
GAACCCAACG TGCGCCTGGG CAAGCTGCGC CAGGATCAGT TCGCCTACGA ACAATTCAAC
GTGATCGACA CCGTGATCAT GGGCCACGAG GAGCTGTGGA AGGTCAAGGC CGAGCGCGAC
CGCATCTATT CGCTGCCGGA GATGAGCGAA GAGGACGGCA TGAAGGTGGG CGAACTCGAA
GGCGAGTTCG CCGAGATGGA CGGCTACACC GCCGAATCCC GTGCCGGCGA GCTGCTCCTG
GGCCTGGGCA TTCCGCTGGA ACAGCACTTC GGCCCGATGA GCGAAGTCGC CCCCGGCTGG
AAGCTGCGCG TGCTGCTGGC TCAGGCGCTG TTCGCCGACC CGGACGTGCT GCTGCTCGAC
GAGCCGACCA ACCACCTGGA CATCAACACC ATCCGCTGGC TGGAAAACAT CCTCACGGCG
CGTAACAGCA CCATGATCAT CATTTCCCAC GACCGACACT TCCTCAATGC GGTCTGCACG
CATATGGCGG ACCTGGACTA CGGCGAGCTG CGTCTGTTCC CCGGCAACTA CGACGAGTAC
ATGACGGCCT CGACCCAGGC GCGCGAGCAG CTGCTGGCCG ACAACGCCAA GAAGAAGGCG
CAGATCGCCG AGCTGCAGAC CTTCGTCAGC CGCTTCTCGG CCAACGCCTC CAAGGCCAAG
CAGGCCACCA GCCGCGCCAA GCAGATCGAC AAGATCCAAC TGGCCGAGGT CAAGCCGTCC
AGCCGCGTCA GCCCGTTCAT CCGCTTCGAC CAGACCAAGA AGCTGCATCG CCAGGCGGTG
ACCGTCGAGA AGCTGTCCAA GGCCTTCGAC GACAAGGTGC TGTTCAAGAA CTTCAGCTTC
ACCATCGAGG CCGGCGAGCG CGTGGCCATC ATCGGCCCCA ACGGCATCGG CAAGACCACC
CTGCTGCGTA CCCTGGTCGG CGAAATGCAG CCGGACGCCG GCAGCGTGAA GTGGACCGAC
AGCGCCGAGG TGGGCTACTA CGCCCAGGAT CACGCGCACG ACTTCGAAGC CGATGAAACC
CTGTTCGAGT GGATGGGCCA GTGGACCACC GGCGAGCAGA ACATCCGCGC CGCGCTGGGC
CGCATGCTGT TCTCCTCCGA CGAGATCCAG AAGTCGGTGA AGGTGCTCTC CGGTGGCGAA
CAGGGCCGCA TGCTGTTCGG CAAGCTGGCC TGCCAGAAGC CCAATGTGCT GGTGATGGAC
GAACCGACCA ACCACCTGGA CATGGAATCG ATCGAGGCGC TCAACCTGGC GCTGGAGAAC
TACCCGGGCA CGCTGATCTT CGTCAGCCAC GACCGCGAGT TCGTCAGCTC CCTGGCCACG
CGCATCATCG AGCTGTCGGA CAACGGCGTG ACCGACTTCT CCGGCACCTA CGACGATTAC
CTGCGCAGCC AGGGCATCAT CGTCTGA
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| Protein sequence | MISTANITMQ FGAKPLFENV SVKFNNGNRY GLIGANGCGK STFMKILGGD LEPSGGQVML
EPNVRLGKLR QDQFAYEQFN VIDTVIMGHE ELWKVKAERD RIYSLPEMSE EDGMKVGELE
GEFAEMDGYT AESRAGELLL GLGIPLEQHF GPMSEVAPGW KLRVLLAQAL FADPDVLLLD
EPTNHLDINT IRWLENILTA RNSTMIIISH DRHFLNAVCT HMADLDYGEL RLFPGNYDEY
MTASTQAREQ LLADNAKKKA QIAELQTFVS RFSANASKAK QATSRAKQID KIQLAEVKPS
SRVSPFIRFD QTKKLHRQAV TVEKLSKAFD DKVLFKNFSF TIEAGERVAI IGPNGIGKTT
LLRTLVGEMQ PDAGSVKWTD SAEVGYYAQD HAHDFEADET LFEWMGQWTT GEQNIRAALG
RMLFSSDEIQ KSVKVLSGGE QGRMLFGKLA CQKPNVLVMD EPTNHLDMES IEALNLALEN
YPGTLIFVSH DREFVSSLAT RIIELSDNGV TDFSGTYDDY LRSQGIIV
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