Gene Pmen_2002 details

Gene Information

• Locus tag: Pmen_2002
• ID: 5109893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 2213191
• End bp: 2213799
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640503243
• Product: azoreductase
• Protein accession: YP_001187495
• Protein GI: 146307030
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1182] Acyl carrier protein phosphodiesterase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0549421
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.00845677
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAACTGT TGCACCTCGA TTCCAGCATC CTCGGTGATG CTTCCGCTTC CCGCCAGCTC 
AGCCGCTCCG TGGTCGAGGC CTGGAGCGCA GTCGAGCCTG GCGTTCAGGT GACCTACCGC 
GACCTGGCCA GCGATGCGCT GAGCCACTTT TCCGCCGCCA GCCTGGTAGC GGCCGGTACC 
CCGGCCGAGC TGCGCGATGC CGCCCAGAAG CACGAGGCCG AACTGGCCGA ACGCACCCTG 
GAAGAATTTC TCGCCGCCGA CGCCATCGTC ATCGGCGCAC CGATGTACAA CTTCGCCATT 
CCCAGCCAGC TGAAGGCCTG GATCGACCGC ATCGCGGTCG CCGGCAAGAC CTTCAAGTAC 
ACCGAGAACG GCGTGGTCGG TCTGGCAGGT GGCAAGACCG TGGTGATCGC CTCCAGCGCC 
GGCGGCATTC ACGCCGGTCA GCCCTCCGGG CAGGCGCATG TGGACTATGT GGTGCGCATG 
CTCAACTTCG TTGGCATAGA CGACATCCAG ATCGTTCGCG CCGAAGGCCT GGCACTCGGT 
GGCGACGCGC GGGCGACGGC GATGAGCGCC GCGGCGCAGC GTATCGACGA GCTGTTCACC 
ACCGCCTGA 

 

Protein sequence

MKLLHLDSSI LGDASASRQL SRSVVEAWSA VEPGVQVTYR DLASDALSHF SAASLVAAGT 
PAELRDAAQK HEAELAERTL EEFLAADAIV IGAPMYNFAI PSQLKAWIDR IAVAGKTFKY 
TENGVVGLAG GKTVVIASSA GGIHAGQPSG QAHVDYVVRM LNFVGIDDIQ IVRAEGLALG 
GDARATAMSA AAQRIDELFT TA