| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1998 |
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| Symbol | |
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| ID | 5109889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2206701 |
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| End bp | 2208845 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503239 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001187491 |
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| Protein GI | 146307026 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0164438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCA GCCGTCTTTC GATCCAATGG AAGATCACCC TGCTCGCCGG CCTCTGCCTG
CTCGCCATCG TCACCCTGCT GGTGGGAGCA TCGCAGTATC AGTCCAGCCG CAGCGCCGCT
TTGGTAGACA AGGCCAGCTC CAGCATGCTG GAGGAAAGCG CCAAGCTGCG CCTGCAGGCA
CGTGGCGAGC TGCAGGCAAT GCGCATCCAG CGCTACTTCA TGGACGCCTA TCAATACGGC
AAGGGCTTTT CCCGGCAGAT CCTGTTCCTG CGCGAACAGG CCGAGAAACG CTTTCTCGAT
GCCTTCGACC TGCGCGAAGA CCTGACGCGC CAGGTACGCA CCAGCCTGGA GGCCAACCCC
GCCCTGCTCG GCCTTTATCT GGTATTCGAA CCCAATGCGC TGGACGGCAA GGACGAACTG
TTCGCCGACC AGGCCGAGCT GGGCAGCAAC GACGCCGGAC GTTTCTCGCT GTACTGGGCG
CAGCCCACCC CGGGCCAGCT CGAGTCCGAA TCGATGACCG AACAGCTGCT CGGCGACACC
ACGCCCGGGG CCAACGGCGT CGCCTACAAC GCCTGGTACA CCTGCCCGCG CGAAACCCGC
AAGACCTGCG TGCTGGAGCC CTACTACGAC GAGGTCGGCG GCCAGCAGAC ACTGATGACC
AGCATCGCCT TCCCCCTGGA ACTGGACGGC AAGGTGATCG GCGTGATGGG CGTGGACATC
AGCCTGGCCA GCCTGCAGCA GATCAGCCTG GAGGCCAATC GCGACCTGTA CGACGGCCAG
GGCCATATCA GCATCTTCAG CCCCGGCGCC CTGCTCGCCG GCCACAGCCG CGATCAGAGC
CTGCTCAGCC TGCCGGTCGC CCGAGCCTAT GCCGAGCATG CCAGCGAACT GGCCGCGCTG
ATCAAGGCCG GCGGCCAGGC GGAGCTGCAT CACGGCGACA TGCTGCGCGT CGTCAGCCCG
TTCAGGCCGA TCCCCGAAGC CCAGCCCTGG AGCGTGCTGC TCGAGGTGCC GGAGAAGGTG
CTGCTGGCCC GCGCCATCGA ACTCGGTCAT CAGCTCGATG CCAACCGTGC CAGCGACAGC
CTGACCGCCC TGCTGATGGG GCTGCTGGCC GTGGTGGCCG GTCTGCTGCT GATGTGGCTT
ACGGCACGCG GCGTGACCCG ACCGATTCTC GGTGTGGCCG CCATGCTCAA GGACATCGCC
AGTGGCGAAG GCGACCTGAC CCGTCGTCTG CAATACGCCA GGCAGGATGA GTTGGGCGAG
CTGGCCGGCT GGTTCAACCG TTTTCTCGAC AAGCTGCAGC CGATCATCGC CGACGTGAAG
AGCAGCGTGC TCGATGCGCG CAGCACCGCC GACCAGTCAG CCGCCATCGC CAGCCAGACC
AGCGCCGGCA TGCAGCAGCA GTATCGCGAG GTCGATCAGG TGGCCACCGC CTTCCAGGAA
ATGAGCGCCA CCGCCCAGGA CGTGGCGCAC AACGCCGCAC AGGCAGCGGA GGCCGCACGC
AACGCCGACC AGGCCAGCCG TGAAGGCCTG CAGGTGATCG ACAGGACCAC CAGCAGCATC
GAGTTGCTGG CCAACGAAAT GAACGTTGCC ATGCAGGAAG TCGAGGGCCT GGCCAGCAGC
AGCGAGCAGA TCGGCTCGGT GCTCGAGGTG ATTCGCTCGA TCGCCGAGCA GACCAACCTG
CTCGCCCTCA ACGCGGCCAT CGAAGCAGCC CGTGCCGGCG AGGCCGGTCG CGGCTTCGCG
GTGGTCGCCG ACGAGGTGCG CAACCTGGCC AAACGCACCC AGGACTCGGT CGAAGAAATC
CGCCAGGTGA TCGAGGGCCT GCAGAACGGC ACCCGTGAGG TGGTCAGCAC CATGCACAGC
AGCCATCGCC AGGCCCAGGG CAGCGTCGAG CAGGTCAGCC AGGCCGTGGC GGCGCTGCAG
CGCATCGGTC AGGCCGTCAG CCTGATCACC GACATGAACC TACAGATCGC CAGCGCCGCG
GAGGAGCAGA GTTCGGTGGC CGAGGAGATC AACCGCAACG TCGCCTCGAT CCGCGACGTC
ACCGAGGCCA TTACCGCGCA GGCCGACGAG TCGGCGCAGG TCAGCCAGAA CCTCAATCGC
CTGGCCAATC ACCAGCAGAG CCTGATGGAT CAGTTCCGCG TCTGA
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| Protein sequence | MLFSRLSIQW KITLLAGLCL LAIVTLLVGA SQYQSSRSAA LVDKASSSML EESAKLRLQA
RGELQAMRIQ RYFMDAYQYG KGFSRQILFL REQAEKRFLD AFDLREDLTR QVRTSLEANP
ALLGLYLVFE PNALDGKDEL FADQAELGSN DAGRFSLYWA QPTPGQLESE SMTEQLLGDT
TPGANGVAYN AWYTCPRETR KTCVLEPYYD EVGGQQTLMT SIAFPLELDG KVIGVMGVDI
SLASLQQISL EANRDLYDGQ GHISIFSPGA LLAGHSRDQS LLSLPVARAY AEHASELAAL
IKAGGQAELH HGDMLRVVSP FRPIPEAQPW SVLLEVPEKV LLARAIELGH QLDANRASDS
LTALLMGLLA VVAGLLLMWL TARGVTRPIL GVAAMLKDIA SGEGDLTRRL QYARQDELGE
LAGWFNRFLD KLQPIIADVK SSVLDARSTA DQSAAIASQT SAGMQQQYRE VDQVATAFQE
MSATAQDVAH NAAQAAEAAR NADQASREGL QVIDRTTSSI ELLANEMNVA MQEVEGLASS
SEQIGSVLEV IRSIAEQTNL LALNAAIEAA RAGEAGRGFA VVADEVRNLA KRTQDSVEEI
RQVIEGLQNG TREVVSTMHS SHRQAQGSVE QVSQAVAALQ RIGQAVSLIT DMNLQIASAA
EEQSSVAEEI NRNVASIRDV TEAITAQADE SAQVSQNLNR LANHQQSLMD QFRV
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