| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1995 |
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| Symbol | |
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| ID | 5109886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2203901 |
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| End bp | 2204569 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503236 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001187488 |
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| Protein GI | 146307023 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.21218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGT TGCTGGTTGA GGATCACGTA CCCCTGGCCG ATGAGCTGAC CGCCAGCCTG
ACGCGCCAAG GGTACGCCGT GGACTGGCTG GCCGATGGCC GCGATGCTGC CTATCAGGGC
GCCAGCGAGC CGTACGACCT GATCATTCTC GACCTCGGTC TGCCGGGCAA GCCAGGCCTC
GAGGTGCTGC AGGAGTGGCG TGCCGGCGGC CTGTCGACGC CGGTACTGGT GCTGACCGCG
CGTGGCTCCT GGGCCGAGCG CATCGAGGGG CTCAAGGCCG GTGCCGACGA CTACCTGACC
AAACCTTTTC ATCCCGAGGA ACTGGCCCTG CGCATCCAGG CGCTGTTGCG TCGTGCCCAT
GGCCTGGCCA ACCAGCCGCA ACTGGAAGCC GCCGGTCTGC AGCTGGACGA GAGCCGTCAG
TGCGTGACTT CTGGCGACGA GGTCATCGAC CTGACGGCCG CCGAGTTTCG CCTGCTGCGC
TATTTCATGC TGCATCCCGG GCAGATCCTT TCCAAGAGTC ATCTGGCCGA CCACCTCTAC
GACGGGGAAA CCGAACGCGA TTCCAACGTC ATCGAGGTGC ACGTCAACCG TCTGCGCGGC
AAGCTCGGGC GCAACGTGAT CGAGACGCGT CGGGGCCAGG GTTATCGCTT TACCGGAGAA
CGGGGTTGA
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| Protein sequence | MRLLLVEDHV PLADELTASL TRQGYAVDWL ADGRDAAYQG ASEPYDLIIL DLGLPGKPGL
EVLQEWRAGG LSTPVLVLTA RGSWAERIEG LKAGADDYLT KPFHPEELAL RIQALLRRAH
GLANQPQLEA AGLQLDESRQ CVTSGDEVID LTAAEFRLLR YFMLHPGQIL SKSHLADHLY
DGETERDSNV IEVHVNRLRG KLGRNVIETR RGQGYRFTGE RG
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