| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1948 |
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| Symbol | |
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| ID | 5110075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2145145 |
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| End bp | 2146320 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503182 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001187441 |
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| Protein GI | 146306976 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.105929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGA TTCGCCAGTC CGCCCTGCTA GTTCTCGCCC TGCTCTGCGC CGGCGCCGCC
TGTGCCAGCG AGCTGCAGGT GCGCATCGGC TACCTGGCCC ACCTGCCGCC GCGCGGGCCG
CTGCTGTCCA ATGTCATCCC CGAGCCGCTG GACGCCGGCC GCCGCGGCGC CGAGCTGGCG
ATTGCCGACA GCAACAGCAC CGGGCGTTTT CTCAAGCAGA GCTACAGCCT GGAGAGTGCC
GAGAGCGACG ACGCCGAAGC CGTGCTTGCT GCCGCCGATG CCCTGCATGT CCAGGGCATT
CGCCTGTTCG TGATCAACGC CCCCGCCGCT ACCCTGCGCC AGCTCAGCCA GCGCCTGCCC
GACAGCCTGC TGCTCAACGC CGGCAGCGCC GACGACAGCC TGCGCCACGA ACAATGCCTG
GGCAACGTGC TGCACACCCT GCCCAGCCGC GCCATGCTGA CCGACGCCCT GGCGCAGTTT
CTCGCCGTGC GCAAATGGAC GCGCTGGCTG CTGGTGACCG GCAACACCGA GGACGACCTC
GCCTACGCCG AGGCGCTCAA GCGCGCGGCC AAGCGCTTCG GCCACAAGAT CGTCGCGGAA
AAACCCTGGA GCTTCGACAA CGACCAGCGC CGCAGCGCCC AGGCGGAAAT GCCGCTGTTC
ACCCAGAGCG CCGAGTACGA CGTGGTGCTG GTGGCCGACG AGCGCGGCGA CTTCGGCGAG
TACCTGCCCT ACAACACCTG GTACCCGCGC CCGGTGGCCG GCACCCAGGG TCTGACCCCG
ACCGCCTGGC ACAAGAGCGT GGAAACCTTC GGCGCCGCAC AACTGCAGAA GCGTTTCGAG
GAACTGGCCG GGCGCTGGAT GAACGACCGC GACTTCGCCG CCTGGATGGC CGTACGCAGC
CTCGCCACTG CCGTGACCAA GCTGCGCGCC GCCGACCCGC AGGCCATCCG CCACCTGCTG
CTGAACGAAC AACTGCCGCT GGATGGTTTC AAGGGGCGCA AGCTGAGCTT CCGCCCGTGG
AACGGCGAGC TGCGCCAACC GATCCCGCTG GTACACCCGC GCGCCCTGGT CAGCACCTCG
CCGCAGGACG GCTTCCTGCA TCCCAGCAAT GAAATGGACA GCCTCGGCTA CGACCGGCCT
GAGGTGAAGT GCGATCTGGC GGGCAGCGTG AATTGA
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| Protein sequence | MRQIRQSALL VLALLCAGAA CASELQVRIG YLAHLPPRGP LLSNVIPEPL DAGRRGAELA
IADSNSTGRF LKQSYSLESA ESDDAEAVLA AADALHVQGI RLFVINAPAA TLRQLSQRLP
DSLLLNAGSA DDSLRHEQCL GNVLHTLPSR AMLTDALAQF LAVRKWTRWL LVTGNTEDDL
AYAEALKRAA KRFGHKIVAE KPWSFDNDQR RSAQAEMPLF TQSAEYDVVL VADERGDFGE
YLPYNTWYPR PVAGTQGLTP TAWHKSVETF GAAQLQKRFE ELAGRWMNDR DFAAWMAVRS
LATAVTKLRA ADPQAIRHLL LNEQLPLDGF KGRKLSFRPW NGELRQPIPL VHPRALVSTS
PQDGFLHPSN EMDSLGYDRP EVKCDLAGSV N
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