| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1947 |
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| Symbol | |
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| ID | 5110074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2144098 |
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| End bp | 2145063 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503181 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001187440 |
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| Protein GI | 146306975 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.107167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTA CCCCTCTCGC CTGCGCCGTC GCCTTCGGCC TGGCCTGCCA CTCGGCCTTC
GCCACCACTG CCTATGTGTC CAACGAGAAG GACGACAGCA TCAGCGTGAT CGACCTGAAC
ACGCTGGAGG TCACCGACAC CCTGGCCGTC GGCATGCGCC CGCGCGGCCT GCTGCTGTCC
TCCGACGACA CGCTCTTGTA CATCTGCGCC AGCGACTCGG ACCGGGTGCA GGTGATGGAC
CTGGCCACGC GCAAGATCAT CAAGGAGCTG CCCTCCGGCG CCGACCCCGA GCAATTCGCC
CTGCACCCCA ACGACCGCTG GCTGTACATC TCCAATGAGG ACGATGCGCT GGTCACCGTG
GTCGACACCC AGAGCGACGA GGTGCTGGCG CAGATCGAGG TGGGCGTCGA GCCCGAAGGC
ATGGCGGTGA GCCCGGACGG CAAGTGGGCG GTCAACACCA GCGAAACCAC CAACATGCTG
CACTGGATCG ACACCAGCAC CCAGCAACTG GTGGACAACA CCCTGGTCGA CCAGCGCCCG
CGCCATGTGG AATTCGACAA GGACGGCAAA CGCCTGTGGG CCTCGGCCGA GATCGGCGGC
ACGGTCACGG TGATGGACGT CGACTCGCGC GAGATCCTCA AGGTGCTGCG CTTCGAGATC
AAGGGCGTGC ACCCGGACAA GGTGCAGCCG GTGGGGGTCA AGCTCAGCGA TAACGGCAAG
TACGCCTTCG TCGCCCTCGG CCCGGCCAAC CATGTCGCCG TGGTCGATGC CAAGAGCTTC
GAGGTGCTCG ACTACCTGCT GGTGGGCCGG CGCGTCTGGC ACCTGGCCTT CACCCCGGAT
CAGAAGCGCC TGCTGACCAC CAACGGCGTC AGTGGCGATG TCTCTGTGAT CGATGTCGAT
GCGCTCAAGG TGACCAAGTC GATCAAGGTC GGCCGCTATC CCTGGGGCGT GGTGGTGACG
CCATGA
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| Protein sequence | MRLTPLACAV AFGLACHSAF ATTAYVSNEK DDSISVIDLN TLEVTDTLAV GMRPRGLLLS
SDDTLLYICA SDSDRVQVMD LATRKIIKEL PSGADPEQFA LHPNDRWLYI SNEDDALVTV
VDTQSDEVLA QIEVGVEPEG MAVSPDGKWA VNTSETTNML HWIDTSTQQL VDNTLVDQRP
RHVEFDKDGK RLWASAEIGG TVTVMDVDSR EILKVLRFEI KGVHPDKVQP VGVKLSDNGK
YAFVALGPAN HVAVVDAKSF EVLDYLLVGR RVWHLAFTPD QKRLLTTNGV SGDVSVIDVD
ALKVTKSIKV GRYPWGVVVT P
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