Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1939 |
Symbol | |
ID | 5110067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2135309 |
End bp | 2136463 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503174 |
Product | hypothetical protein |
Protein accession | YP_001187433 |
Protein GI | 146306968 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGG AACAGTCGGA GGGCGTGCTC AGCGCCGTTT CCAGCACGAA GGACGTGGAG CAGGCCGCTC AGGAGCTGGC GCGCCAGCTG ATCCATCCCT ACCTCGGCTT CGTGCTGTTC TTCTGCTCGG CCGAGTACGA CCTCGAAGCC CTCGGCCGGG CTCTGGAGCA GCACTTCGGC GGCGTCAGCC TGGTCGGCTG TACCAGCGCC GGCGAGATCA CCCCGCAGGG CTACGGCCGC GGCTGCGTGG TGGCGCTGGG CTTCGACCTG CGCTGCTTCT CCATCGCCAG CGCGCTGATC GACGAGATGG AGCGCTTCAA CCTGCTCGAT GCGCAGCAGC TGGTGGATGG CCTGGTGCGC GACTGTCGCA GCAACGAGCT GGCCTCGATC AAGGGTCACA GCTTCGCCCT GACCCTGCTC GACGGCCTGT CCAGCCGCGA GGAACTGGTG CTCGGCGCGC TCAGCGCGGC GCTGGGCAGC ATCCCGCATT TCGGCGGTTC GGCGGGCGAC GACAACCACC TGACCCACAC TCACGTCTAC CACGGCGGGC GCTTTCACAG CGGCGCGGCG GTGGTGGTGC TGTTCAATAC CTGGCTCGAC TTCGAGGTCT TCAGCACCCA CCACATCCAG CCCAGCGGCG AGAAACTGGT GGTGACCCGC GCCGACAGCG CCAGCCGCCG CGTCTACGAG CTCAACGCCG CGCCGGCCGC GCAGGAATAC GCCGAGCTGA TCGGCGTGCC GCTCGATGCC CTGGACCACC GGGTGTTCGC CGCCTATCCG CTGGCGGTGC GCATCAGCGA TCACTACTAC GTGCGCTCGA TCCAGCAGGT GCACGACGAC CTCAGCCTGA GCTTCTACTG CGCGGTGGAG AACGGCATCG TCCTCACTGC CATGCGTCCC GGGCCGCTGC TGCCGAATCT CGAGCAGCTG TTCGCCGGCC TCGAGCAGCG ACTCGGTCCG TTGCTGCTGA CCATCGGCTG CGACTGTTTC CTGCGCCGCC TGGAGATCGA GAACGACAGC GGCAGCCTGC CGGTGTCGGC CTTTCTGCGT CAGCAGCGGG TGATCGGCTT CAACTCCTAC GGAGAGCAGT TCAATGGCAT GCACATCAAC CAGACCTTCA CCGGAGTCGC CATTGGCCGC CCTGGTCGTG GCTGA
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Protein sequence | MALEQSEGVL SAVSSTKDVE QAAQELARQL IHPYLGFVLF FCSAEYDLEA LGRALEQHFG GVSLVGCTSA GEITPQGYGR GCVVALGFDL RCFSIASALI DEMERFNLLD AQQLVDGLVR DCRSNELASI KGHSFALTLL DGLSSREELV LGALSAALGS IPHFGGSAGD DNHLTHTHVY HGGRFHSGAA VVVLFNTWLD FEVFSTHHIQ PSGEKLVVTR ADSASRRVYE LNAAPAAQEY AELIGVPLDA LDHRVFAAYP LAVRISDHYY VRSIQQVHDD LSLSFYCAVE NGIVLTAMRP GPLLPNLEQL FAGLEQRLGP LLLTIGCDCF LRRLEIENDS GSLPVSAFLR QQRVIGFNSY GEQFNGMHIN QTFTGVAIGR PGRG
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