Gene Pmen_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1939 
Symbol 
ID5110067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2135309 
End bp2136463 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID640503174 
Producthypothetical protein 
Protein accessionYP_001187433 
Protein GI146306968 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGG AACAGTCGGA GGGCGTGCTC AGCGCCGTTT CCAGCACGAA GGACGTGGAG 
CAGGCCGCTC AGGAGCTGGC GCGCCAGCTG ATCCATCCCT ACCTCGGCTT CGTGCTGTTC
TTCTGCTCGG CCGAGTACGA CCTCGAAGCC CTCGGCCGGG CTCTGGAGCA GCACTTCGGC
GGCGTCAGCC TGGTCGGCTG TACCAGCGCC GGCGAGATCA CCCCGCAGGG CTACGGCCGC
GGCTGCGTGG TGGCGCTGGG CTTCGACCTG CGCTGCTTCT CCATCGCCAG CGCGCTGATC
GACGAGATGG AGCGCTTCAA CCTGCTCGAT GCGCAGCAGC TGGTGGATGG CCTGGTGCGC
GACTGTCGCA GCAACGAGCT GGCCTCGATC AAGGGTCACA GCTTCGCCCT GACCCTGCTC
GACGGCCTGT CCAGCCGCGA GGAACTGGTG CTCGGCGCGC TCAGCGCGGC GCTGGGCAGC
ATCCCGCATT TCGGCGGTTC GGCGGGCGAC GACAACCACC TGACCCACAC TCACGTCTAC
CACGGCGGGC GCTTTCACAG CGGCGCGGCG GTGGTGGTGC TGTTCAATAC CTGGCTCGAC
TTCGAGGTCT TCAGCACCCA CCACATCCAG CCCAGCGGCG AGAAACTGGT GGTGACCCGC
GCCGACAGCG CCAGCCGCCG CGTCTACGAG CTCAACGCCG CGCCGGCCGC GCAGGAATAC
GCCGAGCTGA TCGGCGTGCC GCTCGATGCC CTGGACCACC GGGTGTTCGC CGCCTATCCG
CTGGCGGTGC GCATCAGCGA TCACTACTAC GTGCGCTCGA TCCAGCAGGT GCACGACGAC
CTCAGCCTGA GCTTCTACTG CGCGGTGGAG AACGGCATCG TCCTCACTGC CATGCGTCCC
GGGCCGCTGC TGCCGAATCT CGAGCAGCTG TTCGCCGGCC TCGAGCAGCG ACTCGGTCCG
TTGCTGCTGA CCATCGGCTG CGACTGTTTC CTGCGCCGCC TGGAGATCGA GAACGACAGC
GGCAGCCTGC CGGTGTCGGC CTTTCTGCGT CAGCAGCGGG TGATCGGCTT CAACTCCTAC
GGAGAGCAGT TCAATGGCAT GCACATCAAC CAGACCTTCA CCGGAGTCGC CATTGGCCGC
CCTGGTCGTG GCTGA
 
Protein sequence
MALEQSEGVL SAVSSTKDVE QAAQELARQL IHPYLGFVLF FCSAEYDLEA LGRALEQHFG 
GVSLVGCTSA GEITPQGYGR GCVVALGFDL RCFSIASALI DEMERFNLLD AQQLVDGLVR
DCRSNELASI KGHSFALTLL DGLSSREELV LGALSAALGS IPHFGGSAGD DNHLTHTHVY
HGGRFHSGAA VVVLFNTWLD FEVFSTHHIQ PSGEKLVVTR ADSASRRVYE LNAAPAAQEY
AELIGVPLDA LDHRVFAAYP LAVRISDHYY VRSIQQVHDD LSLSFYCAVE NGIVLTAMRP
GPLLPNLEQL FAGLEQRLGP LLLTIGCDCF LRRLEIENDS GSLPVSAFLR QQRVIGFNSY
GEQFNGMHIN QTFTGVAIGR PGRG