| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1922 |
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| Symbol | |
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| ID | 5110050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2114388 |
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| End bp | 2117456 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503157 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001187416 |
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| Protein GI | 146306951 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.209297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.294162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCTCT CCGACGTCTG CATTCGCAGG CCGGTCTTCG CTACCGTCCT GTCGCTGATC
GTGGTGTTGC TGGGGCTGAT GGCCTACGAC CGCCTCAACG TGCGCGAGTA CCCCAATATC
GACGTGCCGA TCGTCACTGT GCAGGTCACC TATCCCGGCG CCAGCCCGGA GATCATGGAA
TCGCAGGTGG CGCAGCCGGT AGAAGATGTG CTCTCGGGGA TCGAGGGGCT GGACTTCGTC
ACCTCCATCA GTCGTGCGGA AAACACCCAG ATCACCGCGC AGTTCCGTCT TGGCCGCAGC
GCCGACGAGG CGGCCAACGA CGTGCGCGAT CACCTGGGGC GGGTGCGCAA CCTGCTGCCG
GACGAGGTGG ACGAACCCAT CGTGCAGAAG GTCGAGGCCG ACGCCCAGCC GGTGATCTGG
ATCGCCTTCC ACAGTGAGCA GCACAGTGCG ATGGAGATCA CCGACGTGCT GGAGCGGGTG
ATCAAGGATC GTCTGCAGAC CATCCCTGGT GTGTCCGAAG TGCAGGTGCG CGGCGCTCGG
ACGTTTTCCA TGCGCATCTG GCTCGACCCG GAGAAGCTGG CGGCGCACAA CCTCACCGTG
CAGGATGTGG AGGACGCCCT GCGCCGGCAG AACGTGGAAA TCCCGGCCGG GCGCATCGAG
TCGCGCGAGC GCGAGTTCAG CGTGCTGTCG GAAACCGATC TGCGCACGCC CGCGCAGTTC
AACGAGCTGA TTCTCGATGA CTCGCAGGAC TACCTGCTGC GTCTGTCCGA CGTTGGTCGC
GCCGAGATCG GCCCGCGCGA CGAACGCACC GTGGTGCGCT TCAAGGGCCT GCCGGCGGTG
ACCCTGGGCC TGGTCAAGCA GGCCACGGCC AACCCGCTGG ACATCTCCGA TGGTCTCGAA
GCCGCCTGGG ACGACGTCAA GGCGCTGTTG CCCGAAGGCA TGAACATGAC GGTGGCCAAC
GACAACTCGC AGTTCATCCG CGAGTCCATC GACAACGTCT TCGCCACCAT CTGGGAGGCA
GTGGCGCTGG TCATCCTGAT CATCTTCATT TTCTTGCGTT CGCTTCGTGC GACCCTAATC
CCGCTGGTGA CCATTCCGGT CTCACTGATC GGCGCCTTCG CCCTGATGTC GCTGATGGGC
TTCACCATCA ACACCCTGAC CCTGCTGGCC ATGGTCCTGG CCATCGGCCT GGTGGTGGAC
GATGCCATCG TCATGCTGGA GAACATCCAC CGCCATATCG AGGCGGGGAT GAAGCCGATG
CAGGCCGCCT TCAAGGGCAG CCGCGAGATC GCCTTCGCGG TGATCGCCAT GACCCTGACC
CTGGCCGCCG TGTTCGCCCC CATCGGCTTC ATGCAGGGCA CCACCGGCAA GCTGTTCACC
GAATTCGCCT GGACGCTGGC CGGCTCGGTG CTGGTGTCCG GTTTCGTCGC TCTGACGCTG
ACGCCGATGA TGTGCGCCGT GTTGCTCAAA CCGCACCAGC ACGAGCAGCG CCATAGCCGT
GTGTACAACC TGATCGAGGG CTTTCTCAAC GGCCTGACCT ACAGCTACAA GCACAGTCTG
GATCGCGCCC TGCGTGCCTG GCCATTGGTG CTCGGCGTAC TGCTGGCGGC CTTCGTGCTG
TGCGCCTGGC TGTTCAGCGG CCTGCGCTCG GAGCTGGCGC CCACCGAAGA CACCGGCACC
ATAGTCGGGG TGTTCAATGG CCCAGACGGC GCCACCATCG ACTACACCGC GCGCTATGCC
CGCGAGGTGG AGGCGGCCTA CGCCAGCATC CCGGAAACCA ACCGCTACCT GATCGTCGCG
GGCTTCCCGA CCGTGGCCCA GGGCATTTCC TTCATGAAGC TGGAGGACTG GGGCGACCGT
GCGCGCAGCC AGTTCGAGAT CCGCAACGAA CTCTTGCCCA AGTTGCAGGA CATCGCCGGC
ATGCGAGTCA CCCCGGTCAA CCGCCCGCCG CTGGGGCAGA GCGCGCGCAA CCAGCCGATC
AACTTCGTCA TCCGCTCGTC CATGGAATAC GCCGAGCTGC AGGGTTACGT CGATCAGCTG
ATGGAGCGCA TGCGCGACTA TCCGGGCCTG GAGGGGTTGG ACAGCGACCT CAAGCTCAAC
TCGCCGCAGC TGCAGATCAA CGTCAACCGC GAGCAGGCCG CAGCCGTGGG CACCGACGTG
TCGGTGATCG GCCGCAGCCT GGAAAGTCTG TTCGGCAGCC GCCAGGTGAC CCGCTTCAAG
CAGAATGGCG AGCAGTACGA CGTGCTGGTG CAGCTGCAGA ACATCGACCG CAGCAACCCG
CAGGACCTGG ACCGCGTGTA CGTGCGCGAC CGCGAAGGCG GCATGGTGCA ACTGTCCAAC
CTGATTTCGG TGCGCGAGAC CGTGGCGCCG CGCGAGCTCA ACCACTTCAA CCAGCTGCGT
GCGGTGACCA TCAGCGCCAA CGTCGGCGCC GGCTACACCC TGGGCGAGGC GCTGGACTAC
CTCGAGGCCG GCGCGCGAGC GGTATTCCCG CCGGAAACCC AGTACGACTA CACCGGCACG
TCGCGCGACT TCAAGGAGTC CAGCTCGGGT ATCGCATTGA TTTTCACCCT GGCCCTGGCG
TTCATCTTCC TGGTGTTGGC CGCGCAGTTC GAGAGCTTCA GCGATCCGCT GATCATCCTG
TTCAGCGTAC CCTTGTCGAT GGCCGGCGCC TTGCTCGCCC TGACCCTGTT CGGCGGCACG
CTGAACATCT ATTCGCAGAT CGGCCTGGTG ACCCTGATCG GTCTGATCAC CAAGCACGGC
ATCCTCATCG TCGAATTCGC CAATCACCTG CTGCGTGAAG GCAGGGAGCT GCGCGGTGCG
GTGATCGAGG CCTCGGTGCA GCGCCTGCGG CCGATCCTGA TGACCACAGG CGCCATGGTG
CTGGGTTCGC TGCCGCTGGC CATCGCCACT GGCGCCGGCG CCGAAAGTCG CCAGCAGATC
GGCCTGGTGA TCGTCGGCGG CCTGCTGGTG GGCACCTTCT TCACCCTTTA CGTGATCCCG
ACGCTGTACC TGCTGCTGCG GCGCTGGGCG CCATTGCGGA TGATCGAGGA AGAGCCCGCC
GCGGCATGA
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| Protein sequence | MILSDVCIRR PVFATVLSLI VVLLGLMAYD RLNVREYPNI DVPIVTVQVT YPGASPEIME
SQVAQPVEDV LSGIEGLDFV TSISRAENTQ ITAQFRLGRS ADEAANDVRD HLGRVRNLLP
DEVDEPIVQK VEADAQPVIW IAFHSEQHSA MEITDVLERV IKDRLQTIPG VSEVQVRGAR
TFSMRIWLDP EKLAAHNLTV QDVEDALRRQ NVEIPAGRIE SREREFSVLS ETDLRTPAQF
NELILDDSQD YLLRLSDVGR AEIGPRDERT VVRFKGLPAV TLGLVKQATA NPLDISDGLE
AAWDDVKALL PEGMNMTVAN DNSQFIRESI DNVFATIWEA VALVILIIFI FLRSLRATLI
PLVTIPVSLI GAFALMSLMG FTINTLTLLA MVLAIGLVVD DAIVMLENIH RHIEAGMKPM
QAAFKGSREI AFAVIAMTLT LAAVFAPIGF MQGTTGKLFT EFAWTLAGSV LVSGFVALTL
TPMMCAVLLK PHQHEQRHSR VYNLIEGFLN GLTYSYKHSL DRALRAWPLV LGVLLAAFVL
CAWLFSGLRS ELAPTEDTGT IVGVFNGPDG ATIDYTARYA REVEAAYASI PETNRYLIVA
GFPTVAQGIS FMKLEDWGDR ARSQFEIRNE LLPKLQDIAG MRVTPVNRPP LGQSARNQPI
NFVIRSSMEY AELQGYVDQL MERMRDYPGL EGLDSDLKLN SPQLQINVNR EQAAAVGTDV
SVIGRSLESL FGSRQVTRFK QNGEQYDVLV QLQNIDRSNP QDLDRVYVRD REGGMVQLSN
LISVRETVAP RELNHFNQLR AVTISANVGA GYTLGEALDY LEAGARAVFP PETQYDYTGT
SRDFKESSSG IALIFTLALA FIFLVLAAQF ESFSDPLIIL FSVPLSMAGA LLALTLFGGT
LNIYSQIGLV TLIGLITKHG ILIVEFANHL LREGRELRGA VIEASVQRLR PILMTTGAMV
LGSLPLAIAT GAGAESRQQI GLVIVGGLLV GTFFTLYVIP TLYLLLRRWA PLRMIEEEPA
AA
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