Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1901 |
Symbol | |
ID | 5110029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2089804 |
End bp | 2090124 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640503132 |
Product | hypothetical protein |
Protein accession | YP_001187395 |
Protein GI | 146306930 |
COG category | [S] Function unknown |
COG ID | [COG5470] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00121592 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.870164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT ATGCCGTTGC CATCGTTCGA GAGACGCAAT TCGGCCCGGA GATAAGGGAA TATCTGCAAC GTATCGATGC GACGCTTGCC CCTTTTTCCG GTGTGTATCG CATCCATGGC GGCCCCTACG TCCCGCTAGA GGGCGTCTGG TCCGCAGATC TGATCATGAT CGAGTTCCCT TCCATGCAGT TGGCCAGGGA TTGGTACGAG TCGGCCGCCT ACCGCGCCAT TCGACCGCTA CGCACCGAGC ACAGCGTCGG CGAGGTCTTT CTGGTCGAAG GCGTTGCACC AGACCACAAA GGCATCGATA TCCTCGGCTA G
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Protein sequence | MTAYAVAIVR ETQFGPEIRE YLQRIDATLA PFSGVYRIHG GPYVPLEGVW SADLIMIEFP SMQLARDWYE SAAYRAIRPL RTEHSVGEVF LVEGVAPDHK GIDILG
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