Gene Pmen_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1901 
Symbol 
ID5110029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2089804 
End bp2090124 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content59% 
IMG OID640503132 
Producthypothetical protein 
Protein accessionYP_001187395 
Protein GI146306930 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00121592 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.870164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT ATGCCGTTGC CATCGTTCGA GAGACGCAAT TCGGCCCGGA GATAAGGGAA 
TATCTGCAAC GTATCGATGC GACGCTTGCC CCTTTTTCCG GTGTGTATCG CATCCATGGC
GGCCCCTACG TCCCGCTAGA GGGCGTCTGG TCCGCAGATC TGATCATGAT CGAGTTCCCT
TCCATGCAGT TGGCCAGGGA TTGGTACGAG TCGGCCGCCT ACCGCGCCAT TCGACCGCTA
CGCACCGAGC ACAGCGTCGG CGAGGTCTTT CTGGTCGAAG GCGTTGCACC AGACCACAAA
GGCATCGATA TCCTCGGCTA G
 
Protein sequence
MTAYAVAIVR ETQFGPEIRE YLQRIDATLA PFSGVYRIHG GPYVPLEGVW SADLIMIEFP 
SMQLARDWYE SAAYRAIRPL RTEHSVGEVF LVEGVAPDHK GIDILG