| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1881 |
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| Symbol | |
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| ID | 5110010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2073299 |
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| End bp | 2074291 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503113 |
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| Product | lysophospholipase-like protein |
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| Protein accession | YP_001187376 |
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| Protein GI | 146306911 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.27985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.592044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCT GCCACTACCC TACCCCCATC ATGCTGCGAG CACTGCTCTT GTCCCTCACC
CTGATCACCG GCCTGGCCCA GGCCAGCACT ACCCGGCAAC TCCCCCTCAG CCTCGACACC
GACCAGGGCA CCCTGTACGG CAGTCTGCTG GTGCCGCAAA GCGACACGCC GGTGCCGGTG
GCGCTTCTGA TCGCCGGCTC CGGCCCCACC GACCGCGACG GCAACAACCC CGCGGGCGGC
CACAACGATG CGCTGAAGAA GCTGGCCCAG GTGTTGGCGC GCAATGGCAT CGCCAGCCTG
CGTTACGACA AGCGCGGCGT GGCCGCCAGC AGCAAAGCCA CACCGGATGA GCGCAACCTC
AGCGTCGAGC GCTACGTGAC CGATGCCGAA GGCTGGGGAC AGCTGCTCAA ACGCGACCCG
CGCTTCGACC GGCTGATCCT CGTCGGCCAC AGCGAAGGTG CGCTCATCGC GAGCCTGGCC
GCCGCCCGCA GCGGCGCCGA TGCCCTGATA TCGATCGCCG GTCCCGCCTA CCCCATCGGC
CAGGTGCTCG ACGCACAACT GGCCATGCGC CTGCCGCCTG CGCAACTGGC GCAGAGCCGG
CGCATCCTCG CCAGCCTGAT CCGCGGGCAG GAACAGGCCG ATGTGCCCGA ACCCCTGCAG
GTGCTGTTTC GTCCCAGCGT ACAGCCCTAC CTGATCAGCC TGCTGCGGCA GAACCCGGCC
GAAGCCTTTG CCGCGCTGGA GATTCCGGCG CTGATCGTGC AGGGCGGTCA CGACGCCCAG
GTCGGGGTGG ACAACGCCGA GATTCTCAAG CAGGCCAAAC CGGATGCCGA ACTGGCGCTG
ATCCCCGGCA TGAACCACGT CATGCGCATC ACCCCCCTGC CCTGGCAGGA ACAGCTGGCC
TCCTACAACG ATCCTCAGCT ACCGTTGGCG CGTGCGCTTG GTGAACACAT CGTCCGTTTC
ATTCGCTCCA GTACGGAGCA AAATGGTCGA TAA
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| Protein sequence | MPVCHYPTPI MLRALLLSLT LITGLAQAST TRQLPLSLDT DQGTLYGSLL VPQSDTPVPV
ALLIAGSGPT DRDGNNPAGG HNDALKKLAQ VLARNGIASL RYDKRGVAAS SKATPDERNL
SVERYVTDAE GWGQLLKRDP RFDRLILVGH SEGALIASLA AARSGADALI SIAGPAYPIG
QVLDAQLAMR LPPAQLAQSR RILASLIRGQ EQADVPEPLQ VLFRPSVQPY LISLLRQNPA
EAFAALEIPA LIVQGGHDAQ VGVDNAEILK QAKPDAELAL IPGMNHVMRI TPLPWQEQLA
SYNDPQLPLA RALGEHIVRF IRSSTEQNGR
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