Gene Pmen_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1855 
SymbolihfB 
ID5109985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2045735 
End bp2046022 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content57% 
IMG OID640503087 
Productintegration host factor subunit beta 
Protein accessionYP_001187351 
Protein GI146306886 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.756472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT CGGAGTTGAT CGAAAGAATT GTCACCCACC AAGGCCAGCT GTCCTCCAAG 
GATGTTGAGC TGGCCATCAA GACCATGCTG GAACAAATGT CCCAGGCCTT GGCCACGGGA
GACCGGATCG AGATTCGCGG CTTTGGCAGC TTCTCGCTGC ATTACCGCGC ACCGAGGGTT
GGTCGTAATC CGAAAACCGG CCAGTCGGTC CGGCTGGATG GCAAGTTCGT GCCGCATTTC
AAGCCGGGGA AGGAACTGCG CGACCGAGTC AATGAAGATG AATCGTAA
 
Protein sequence
MTKSELIERI VTHQGQLSSK DVELAIKTML EQMSQALATG DRIEIRGFGS FSLHYRAPRV 
GRNPKTGQSV RLDGKFVPHF KPGKELRDRV NEDES