| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1852 |
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| Symbol | |
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| ID | 5109982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2040591 |
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| End bp | 2042831 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503084 |
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| Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001187348 |
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| Protein GI | 146306883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGTAA CCGCAGTGCA ATCGAGCGCC CCTAAGATCG GCCGCCTGGT GGTGGTCGGC
CTCGGTCTGA TCGGCGGCTC CTTCGCCAAG GGCTTGCGCG CGCGCGGCCT GTGCCGTGAG
GTGGTGGGCG TCGATCTGGA TGCCGAATCG CGCCGCCTGG CCGTGCAGTT GGGGGTGGTC
GATCGTTGCG AGACCGATCT GGCGGCCGCC TGTCAGGGGG CCGAGGTGAT CCAGCTGGCG
GTGCCTATCC TGGCCATGGA AAAGCTGCTG GCCGAACTGG CCAAGCTAGA CTTGGGCGAC
GCCGTGCTGA CCGACGTCGG TAGTGCCAAG GGCAACGTGG TGCGCGCTGC GCGCCTGGCG
TTTCAGGGCA AAACCGTGCG GCTGGTGCCT GGTCATCCCA TCGCGGGGTC CGAGCAGAGC
GGTGTGGAGG CTGCCAACGC GGAGCTGTTC CGTCGCCACA AGGTTATCCT GACACCCTGC
GAGCACAGCG ACGAGGCCGC GCTAGCCTTG GTGGAGAGCC TGTGGCGCGA GCTGGGTGCG
GACGTCGAGA CGATGGAGGT AGAACACCAC GACCAGGTGC TCGCCGCCAC CAGCCACCTG
CCGCACCTGT TGGCCTTCAC CCTGGTCGAC TCGCTGGCCA AGCGCAGCGA GAACCTGGAA
ATTTTCCGCT ATGCCGCTGG CGGCTTCCGC GACTTCACGC GGATCGCCGG CAGTGACCCG
GTGATGTGGC ACGATATCTT CCTCGCCAAC CGCGAGGCGG TGCTGCGCAC ACTGGATACA
TTTCGCGACG ACCTCGACGC CTTGCGCGAC GCGGTCGACG CCGGGGATGG GCATCAACTC
CTGGGCGTGT TCACCCGCGC CCGCGTTGCC CGCGAACATT TCAGCAAAAT TCTGGCCCGC
AGGGCCTATG TGGACGCTAT GCACTCGACC GATCTGATTT TCCTGGCAAA ACCCGGTAGC
AGCCTGTCCG GACGCATTCG TGTGCCCGGC GACAAATCCA TCTCGCATCG TTCGATCATG
CTGGGTTCGC TGGCTGAAGG CACCACCGAG GTCGAAGGCT TCCTCGAAGG CGAGGACGCC
CTGGCCACCC TGCAGGCGTT CCGCGACATG GGCGTGGTCA TCGAAGGCCC GCACCACGGC
CGCGTGACCA TTCACGGCGT TGGTCTCAAG GGCCTGAAGG CTCCGGCTGG CCCGCTGTAC
ATGGGCAACT CCGGCACCTC CATGCGCCTG CTCTCCGGCC TGCTCGCTGC ACAGCCGTTC
GACACCGTGC TGACCGGCGA TGCCTCGCTG TCCAAGCGCC CGATGAATCG CGTGGCCAAG
CCGCTGCGCG AGATGGGCGC AGTGATCGAG ACTGGTCCGG AAGGCCGTCC GCCGCTGACC
ATCAAGGGCG GCCAGCGCCT GACCGGCATG GACTACGAAA TGCCGATGGC CAGCGCCCAG
GTCAAATCCT GCCTGCTGCT GGCCGGCCTG TATGCGGCAG GCCGCACCTC GGTGACCGAG
CCGGCGCCGA CCCGTGACCA CACCGAGCGC ATGCTGCGCG GCTTCGGCTA CCCGGTGAGC
GTGGAGGGCA GCACCGCCAG CGTCGAGTCC GGCCACAAGC TGACCGCCAC GCGTATCGAA
GTGCCCGCCG ATATTTCCTC GGCCGCCTTC TTCCTGGTCG CGGCGAGCAT CGCCGAAGGC
TCCGAGCTGG TGCTCGAGCA CGTCGGCATC AACCCGACCC GCACCGGGGT GATCGATATC
CTCAAACTGA TGGGCGGCGA TATCACCCTG GAAAACCAGC GTGAGGTGGG TGGCGAGCCG
GTGGCCGATA TCCGCGTGCG TAGCGCCAAA CTCAAAGGCA TCGACATTCC CGAAGACCTG
GTGCCCCTGG CCATCGACGA GTTCCCGGTG CTGTTCGTCG CCGCCGCCTG CGCAGAAGGC
CGCACCGTGC TGCGTGGCGC CGAGGAGCTG CGGGTCAAGG AGTCCGACCG CATCCAGGTC
ATGGCCGACG GCCTGATCAC CCTGGGCGTC AAGGCCGAGC CGACCCCCGA CGGCATCGTT
ATCGAAGGCG GCTCTATCGG CGGTGGCGAG GTCTGGGCCC ATGGCGACCA CCGCATCGCC
ATGTCCTTCA GCGTCGCCTC GCTGCGCGCC AGCGCGCCGA TCCGCATCCA CGACTGCGCC
AACGTCGCCA CCTCTTTCCC CAACTTCCTC GCGCTGGCGG CTGAAGTCGG CATCCAGGTG
GCAGAAGAGG GCAAGGCATG A
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| Protein sequence | MTVTAVQSSA PKIGRLVVVG LGLIGGSFAK GLRARGLCRE VVGVDLDAES RRLAVQLGVV
DRCETDLAAA CQGAEVIQLA VPILAMEKLL AELAKLDLGD AVLTDVGSAK GNVVRAARLA
FQGKTVRLVP GHPIAGSEQS GVEAANAELF RRHKVILTPC EHSDEAALAL VESLWRELGA
DVETMEVEHH DQVLAATSHL PHLLAFTLVD SLAKRSENLE IFRYAAGGFR DFTRIAGSDP
VMWHDIFLAN REAVLRTLDT FRDDLDALRD AVDAGDGHQL LGVFTRARVA REHFSKILAR
RAYVDAMHST DLIFLAKPGS SLSGRIRVPG DKSISHRSIM LGSLAEGTTE VEGFLEGEDA
LATLQAFRDM GVVIEGPHHG RVTIHGVGLK GLKAPAGPLY MGNSGTSMRL LSGLLAAQPF
DTVLTGDASL SKRPMNRVAK PLREMGAVIE TGPEGRPPLT IKGGQRLTGM DYEMPMASAQ
VKSCLLLAGL YAAGRTSVTE PAPTRDHTER MLRGFGYPVS VEGSTASVES GHKLTATRIE
VPADISSAAF FLVAASIAEG SELVLEHVGI NPTRTGVIDI LKLMGGDITL ENQREVGGEP
VADIRVRSAK LKGIDIPEDL VPLAIDEFPV LFVAAACAEG RTVLRGAEEL RVKESDRIQV
MADGLITLGV KAEPTPDGIV IEGGSIGGGE VWAHGDHRIA MSFSVASLRA SAPIRIHDCA
NVATSFPNFL ALAAEVGIQV AEEGKA
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