Gene Pmen_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1834 
Symbol 
ID5109964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2021439 
End bp2022350 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID640503066 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001187330 
Protein GI146306865 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.297742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.423951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGCA TAATAACAAA CATCAATCTC AACGAAAGCG CCGCCATGAT TGTCGATCTG 
CACTGCCACA GCACCGCCTC CGATGGCGCC CTGGCCCCGT CTGTACTGGT GGAGCGGGCC
CATGCGCGTG GCGTGCGAGT GCTGGCTCTG ACCGATCACG ACACCCTGGA AGGGCTCGAC
GAGGCGCAGC GCACTGCGGC GGCTCTGGAC ATGCAACTGG TCAACGGCAT CGAGCTGTCC
TGCACCTGGG GCGGAGCCAC CATTCATGTG CTGGGGTATG CCTTCGAGCG CGAAGCGCCG
GCGCTGCGCC AGGCCATCGA GGCCTTGCAC CAGGGGCGCT GGCAGCGCGC GCAGGAAATC
GATCGACGCC TGGCTGCCAA GGGCATGCCC GGCGCCCTGG ACGGCGCACG GGCTGTGCAG
CAGGCGCTCG GCGACAGCGG CAACGCACCG GCGCGGCCGC ATTTCGCCGA ATTTCTGGTG
CGGGCCGGGC ATGTACGCGA TCGCGCCGAG GCGTTTCGCA AGTGGTTGGG CTCGGGCAAG
CTGGGCGACG TCAAACAGCA CTGGCCGGTG CTGGAGGACA CGCTGGCCAC CTTGCGTGCG
GCCAAGGCCT GGATCAGCCT GGCGCATCCC TGGCAGTACG ACTTTACTCG CAGTAAGCGT
CGGCGCTTGG TGGCCGACTT CGCCGCGGCA GGCGGGCATG CCCTGGAAGT GGTCAATGGC
ATGCAACCGG CCGAGCAGGT CGGCGGTCTG GCGATTCTGG CGCGTGAATT CGGCTTGATG
GCCAGCGTCG GCAGCGATTT CCATGCGCCG GGCGACTGGT CCGAACTGGG CATGTACCGC
CCGTTGCCTG ATGACCTGAC GGCGCTCTGG GAGCGCTTCG AACATGCACA GCCACCCACT
GTCCCTTCAT GA
 
Protein sequence
MWGIITNINL NESAAMIVDL HCHSTASDGA LAPSVLVERA HARGVRVLAL TDHDTLEGLD 
EAQRTAAALD MQLVNGIELS CTWGGATIHV LGYAFEREAP ALRQAIEALH QGRWQRAQEI
DRRLAAKGMP GALDGARAVQ QALGDSGNAP ARPHFAEFLV RAGHVRDRAE AFRKWLGSGK
LGDVKQHWPV LEDTLATLRA AKAWISLAHP WQYDFTRSKR RRLVADFAAA GGHALEVVNG
MQPAEQVGGL AILAREFGLM ASVGSDFHAP GDWSELGMYR PLPDDLTALW ERFEHAQPPT
VPS