Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1834 |
Symbol | |
ID | 5109964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2021439 |
End bp | 2022350 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503066 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001187330 |
Protein GI | 146306865 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.297742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.423951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGGCA TAATAACAAA CATCAATCTC AACGAAAGCG CCGCCATGAT TGTCGATCTG CACTGCCACA GCACCGCCTC CGATGGCGCC CTGGCCCCGT CTGTACTGGT GGAGCGGGCC CATGCGCGTG GCGTGCGAGT GCTGGCTCTG ACCGATCACG ACACCCTGGA AGGGCTCGAC GAGGCGCAGC GCACTGCGGC GGCTCTGGAC ATGCAACTGG TCAACGGCAT CGAGCTGTCC TGCACCTGGG GCGGAGCCAC CATTCATGTG CTGGGGTATG CCTTCGAGCG CGAAGCGCCG GCGCTGCGCC AGGCCATCGA GGCCTTGCAC CAGGGGCGCT GGCAGCGCGC GCAGGAAATC GATCGACGCC TGGCTGCCAA GGGCATGCCC GGCGCCCTGG ACGGCGCACG GGCTGTGCAG CAGGCGCTCG GCGACAGCGG CAACGCACCG GCGCGGCCGC ATTTCGCCGA ATTTCTGGTG CGGGCCGGGC ATGTACGCGA TCGCGCCGAG GCGTTTCGCA AGTGGTTGGG CTCGGGCAAG CTGGGCGACG TCAAACAGCA CTGGCCGGTG CTGGAGGACA CGCTGGCCAC CTTGCGTGCG GCCAAGGCCT GGATCAGCCT GGCGCATCCC TGGCAGTACG ACTTTACTCG CAGTAAGCGT CGGCGCTTGG TGGCCGACTT CGCCGCGGCA GGCGGGCATG CCCTGGAAGT GGTCAATGGC ATGCAACCGG CCGAGCAGGT CGGCGGTCTG GCGATTCTGG CGCGTGAATT CGGCTTGATG GCCAGCGTCG GCAGCGATTT CCATGCGCCG GGCGACTGGT CCGAACTGGG CATGTACCGC CCGTTGCCTG ATGACCTGAC GGCGCTCTGG GAGCGCTTCG AACATGCACA GCCACCCACT GTCCCTTCAT GA
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Protein sequence | MWGIITNINL NESAAMIVDL HCHSTASDGA LAPSVLVERA HARGVRVLAL TDHDTLEGLD EAQRTAAALD MQLVNGIELS CTWGGATIHV LGYAFEREAP ALRQAIEALH QGRWQRAQEI DRRLAAKGMP GALDGARAVQ QALGDSGNAP ARPHFAEFLV RAGHVRDRAE AFRKWLGSGK LGDVKQHWPV LEDTLATLRA AKAWISLAHP WQYDFTRSKR RRLVADFAAA GGHALEVVNG MQPAEQVGGL AILAREFGLM ASVGSDFHAP GDWSELGMYR PLPDDLTALW ERFEHAQPPT VPS
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