Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1828 |
Symbol | |
ID | 5109958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2017430 |
End bp | 2017990 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503060 |
Product | nitroreductase |
Protein accession | YP_001187324 |
Protein GI | 146306859 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCTC TCGACGCTCT GCTCAACCGT GTTTCCGTGC CGCGCCTGGT CGATCCGGCT CCGGATGCGG CGCAGCGCGA ACTGCTGTTT CGCGCGGCCT TGCGCGCACC CGATCACGGT CAGCTGCGCC CCTGGCGTTT TCTCACGATA GAGGGGCAGG CTCGTGAGCG CATGGGCGAG TTGTTCGCCG AGGCGTTGCT GGCAGCCGAT GCCCAGGCGC CGGAAGAAAA ATTGCTCAAG GCCCGCGGCA TGCCCATGCG GGCGCCGTTG CTGGTGGTGG TGATCGCGCG CATTCAGGCT CATCCCAAGG TGCCGGCGTC CGAGCAGGTG ATCGCTGCCG GTTGTGCGGC CCACGGCATT CTGCTGGCCG CTCACGCCCA GGGCATCGGC GCCGTCTGGC GCACCGGAGA CATGGCCTAT GACGCTCACG TGGCCAAGGG CCTCGGCTTG GCAGCGGACG AGCAGATCAT CGCCTATCTC TACCTCGGTA CGCCGGAGCG TGAATTGCGC CGTGCGCCCG AGCTGCCGCT CGAAGATTTC GTCAGCGCCT GGAACGGCTG A
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Protein sequence | MEALDALLNR VSVPRLVDPA PDAAQRELLF RAALRAPDHG QLRPWRFLTI EGQARERMGE LFAEALLAAD AQAPEEKLLK ARGMPMRAPL LVVVIARIQA HPKVPASEQV IAAGCAAHGI LLAAHAQGIG AVWRTGDMAY DAHVAKGLGL AADEQIIAYL YLGTPERELR RAPELPLEDF VSAWNG
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