| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1812 |
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| Symbol | |
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| ID | 5109942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1998913 |
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| End bp | 2001045 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503044 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001187308 |
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| Protein GI | 146306843 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.646087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.880119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC ACGCCCTGCG CATTCTCAAA GACGTTTTCG GCTATGACGC CTTTCGCGGC
AACCAGGCCG CGATCATCGA GCGCGTGGCC GCGGGCGGCG ATGCCCTGGT ACTGATGCCC
ACCGGTGGTG GCAAGTCGCT GTGCTATCAG GTCCCGGCGT TGATGCGCGA GGGGCTGGCG
GTGGTGGTTT CACCCCTGAT CGCACTGATG GACGATCAGG TGGCAACGCT CGAGGAACTG
GGTGTGGCGG CGGTGGCGCT GAATTCCACC CTGAGCGCGG ATGAGCAGCG GGAGATCGCC
GAGCGCATTC GCCGTGGGCA GATCAAGATG CTCTACCTGG CCCCCGAGCG CCTGGTGCAG
CCGCGCATGC TGAGTTTCCT GCAGGGCCTG GACATTGCCC TGTTCGCCAT CGACGAGGCG
CACTGCGTGT CGCAGTGGGG GCACGATTTC CGCCCCGAGT ATCTGCAGCT CGGTCAGCTT
GCCGAGCTGT TCCCGCAGGT GCCGCGCCTT GCCCTGACCG CCACGGCGGA CAAGCGCACC
CGCGAGGAGA TCGTCCAGCG CCTGCACCTG GACAACGCCG AGCGCTTCCT GTCGAGCTTC
GACCGGCCCA ACATCTTCTA CCGCATCCAG CCCAAGGATC AGCCGCGCAA GCAGCTGCTC
GGCTTTCTCG CCGCGCGCAA GGGCGATGCG GGCATCGTCT ACTGCCTGTC GCGCAAGAAG
GTCGAGGAGG TCGCCGACTT TCTCAGCAGC CAGGGCTTCC CGGCGCTGCC GTATCACGCC
GGCCTGCCCA ACGAGCTGCG CGCCTATCAC CAGAAGCGCT TTCTCAACGA GGAAGGGCTG
ATCATGGTGG CGACCATCGC CTTCGGCATG GGCATCGACA AGCCCAACGT GCGCTTCGTC
TGCCACCTGG ATCTGCCCAA GTCGCTGGAG GCCTACTACC AGGAAACCGG CCGCGCCGGG
CGTGACGGTT TGCCCGCCGA TGCCTGGATG GCGTACGGCC TGCAGGACGT AATTTTCCTC
AAGCAGATGC TGGCCAACTC CGAGGGCGAC GAGCGCCACA AGCGCATCGA ACAGCACAAG
CTCGACGCCA TGCTCGCCCT GTGCGAGGAA ACCCGCTGCC GTCGCCAGGC GCTGCTGGCC
TATTTCGACG AGGAACTGCC GCAGCCCTGC GGGCATTGCG ACAACTGCAT CGATGGCGTC
GAGACCTGGG ACGCCACCGA GCCGGCGCGT CAGGCGCTGT CGGCTATCTA CCGCAGCGGC
CAGCGCTATG GCGTCGGCCA TCTGGTGGAC ATCCTGCTCG GTCGTGACAA TGAGAAGATC
CGCGCCGCCG GGCACCAGCA CCTGGCCGTG TTCGGCATCG GCAAGGGATT TTCCGAGGTC
GAGTGGCGCA CCCTGTTCCG CCAGCTGGTC GCTCGCGGCC TGGCCGACGT CGACCTGGAC
GGCTTCGGCG GCCTGCGCCT GAGCGAGACC TGTCGACCGC TGCTGCGCGG CGAGGTCGGT
CTGCAGCTGC GCCGCGAACC CAAGCCCGCG CAGGCGGCCA AGGCCTCCAG CAGCGCCGCC
AGTCAGCTGG TGCGCGGCCA CGAGCGGGAC ATGTGGGAAG CGCTGCGCAG CCTGCGGCGC
AAGCTGGCCG AGGAGCACAG CGTGCCGCCT TACGTGATCT TCCCCGATGC CACGCTGCTG
GAAATGCTGC GCAGCCAGCC CGGTTCGCTG AGCGAGATGG CCGAGGTCAG CGGCGTCGGC
GCGCGCAAGC TGGAACGTTA CGGCCAAGCC TTCCTGGAAG TGCTCAATGG TAGCGGCGCG
GACGAGGCGC CGGTTCCGGT GGCCGATCTG CGTCACGAAC TGGTCAGCCT GGCACGCGCC
GGCATGACCC CGGCGCAGAT CGCCGGCCAG CTGAACTGCT CCGAAAAGAA CGTCTACAGC
CTGCTGGCCG AGGCTATTTC CGCGCAGCAG CTGAGCCTGG AACAGGCGTT GGACCTGCCG
GAAGACCTGC TGGGCGAGAT TCAGGAGAGC TTTCTCGACG GCGAGGGCGA GCTGCCTGCG
GTAGGCGAGA TCGCTCCGCT ATTCGCCGGC CGCGTCGACG AAGCGGTGCT CTACTGCGTG
CGCGCGGCGC TGCAGGCCGA GTTCGAGCTT TGA
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| Protein sequence | MLDHALRILK DVFGYDAFRG NQAAIIERVA AGGDALVLMP TGGGKSLCYQ VPALMREGLA
VVVSPLIALM DDQVATLEEL GVAAVALNST LSADEQREIA ERIRRGQIKM LYLAPERLVQ
PRMLSFLQGL DIALFAIDEA HCVSQWGHDF RPEYLQLGQL AELFPQVPRL ALTATADKRT
REEIVQRLHL DNAERFLSSF DRPNIFYRIQ PKDQPRKQLL GFLAARKGDA GIVYCLSRKK
VEEVADFLSS QGFPALPYHA GLPNELRAYH QKRFLNEEGL IMVATIAFGM GIDKPNVRFV
CHLDLPKSLE AYYQETGRAG RDGLPADAWM AYGLQDVIFL KQMLANSEGD ERHKRIEQHK
LDAMLALCEE TRCRRQALLA YFDEELPQPC GHCDNCIDGV ETWDATEPAR QALSAIYRSG
QRYGVGHLVD ILLGRDNEKI RAAGHQHLAV FGIGKGFSEV EWRTLFRQLV ARGLADVDLD
GFGGLRLSET CRPLLRGEVG LQLRREPKPA QAAKASSSAA SQLVRGHERD MWEALRSLRR
KLAEEHSVPP YVIFPDATLL EMLRSQPGSL SEMAEVSGVG ARKLERYGQA FLEVLNGSGA
DEAPVPVADL RHELVSLARA GMTPAQIAGQ LNCSEKNVYS LLAEAISAQQ LSLEQALDLP
EDLLGEIQES FLDGEGELPA VGEIAPLFAG RVDEAVLYCV RAALQAEFEL
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