Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1800 |
Symbol | |
ID | 5109930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1976563 |
End bp | 1978128 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503032 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001187296 |
Protein GI | 146306831 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.258308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.504821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGA ACCTGCCAGT GACTCAACGC GAAAGAACCT TTGCCGCCGA TGAGCGCCTG ATCTCCACCA CCGACCTCAA CAGCAAGATC ACCTATTGCA ACGACGCCTT CGTCGCGATC AGCGGCTTTA CCCGCGAAGA GCTGATCGGC CAGCCACACA ACATCGTGCG CCACCCGGAC ATGCCGCCGA GCGTGTTCGG CCATATGTGG GACACCATCA AGCAGGGAAA GCCCTGGATG GGCATCGTCA AGAACCGCTC GAAGAACGGT GACTTCTACT GGGTTAGTGC CTATGTCACG CCGGTGTACG AAGACGGCCG CATGGTCGGT TACGAGTCGG TGCGTTCGCT GCCAAGCGAA GCGCAGAAGC GCCGTGCGGA GCGGCTCTAC GCTCGCCTGC GCGAGGGCAA GCCTGCCGTG CCACATCTGC AGAAGTGGAC CTACAGCCTG GTGCGTTCGT GGCCGCTGAT TCTCGCCGCA GCCCTGATCC TGGGGCTGGA GTCGGTGCTC GACGGGGGCT GGCTGGCCGC CGTCACCTTC GCCATCATGC TCGCGCTCGG GGTCTATCAG TTGTACCGCA CCCGTGCCCT GATCCTGCGG ACGTTGGACG AGCATCCCAA AGCCTTTACC AGCGAACTGG TGGCGCTGAC CTACAGTGAC AACCGAGGCG CCCAGGCATT GCTGGACATG GCCATGATCA GCGAGGAGGC GCGCCTGCAG ACGGCGTTGA CGCGCCTGGA AGATGCGGGA GAGAACGTCA AGAAACGTGC CTCGCAGTCG GCCGACCTGT CGCGCTCCGG TGCTGAGCTG CTCGATCAGC AGCGTGCCGA GACGGATCAG TCGGCCACTG CCATCAACGA AATGGCCGCC ACCATTCAGG AGGTGACGCA CAACGTGCAG AACACCTCGC ACGCCGCCGA AGAGGCCGAC CGGCTGGCCA GGGGCGGGCG CGATCTCGCC GTGGGCAGTC TGGATTCCAT GCGCCAGATG GCCAAGGCGG TCACCGACAT CGGTCAGGCG GTCAACGAGC TGGCCAATTC CACTCAGTCC ATCGGCAGCG TCGCCGATGT GATCACGGCG ATTGCCGAAC AGACCAACCT GCTGGCACTC AATGCCGCCA TCGAGGCCGC GCGGGCGGGT GAGCAGGGCA GAGGGTTTGC CGTGGTGGCC GACGAGGTGC GCTCGCTGGC CTCGCGCACC CGTCAGTCCA CCGAGCAGAT CCACCAGATC ATCGCCGACC TGCGCGCTGG CGCCGAACGC GCAGTGGTCA CCGCGAGCAA GGGCGAAGAG ATTTCCCGTG GCAGCGTGCA GAGCGTGGAG TCGGTACGCG ACGCACTGGA GGGTATCAGC TCGGCGGTGA CGCGCATCTC CGGCATGAGC CAGCAGATGG CAGCCGCTGT CGAGCAGCAG AGCCACGTGG CGGAGGACAT CAGCCGGCAG ATCACCCGCA TCGCCCAGCT GTCCGACCAC AGTGCCGGCC AGGCGCATCA GGGCGCGGCG ATCAGCCGTG AGCTGGAGCA GATGGCCGAC TACCTGCACA GCCTGGCGGA GCGTTTCAAC CGCTGA
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Protein sequence | MRQNLPVTQR ERTFAADERL ISTTDLNSKI TYCNDAFVAI SGFTREELIG QPHNIVRHPD MPPSVFGHMW DTIKQGKPWM GIVKNRSKNG DFYWVSAYVT PVYEDGRMVG YESVRSLPSE AQKRRAERLY ARLREGKPAV PHLQKWTYSL VRSWPLILAA ALILGLESVL DGGWLAAVTF AIMLALGVYQ LYRTRALILR TLDEHPKAFT SELVALTYSD NRGAQALLDM AMISEEARLQ TALTRLEDAG ENVKKRASQS ADLSRSGAEL LDQQRAETDQ SATAINEMAA TIQEVTHNVQ NTSHAAEEAD RLARGGRDLA VGSLDSMRQM AKAVTDIGQA VNELANSTQS IGSVADVITA IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRSLASRT RQSTEQIHQI IADLRAGAER AVVTASKGEE ISRGSVQSVE SVRDALEGIS SAVTRISGMS QQMAAAVEQQ SHVAEDISRQ ITRIAQLSDH SAGQAHQGAA ISRELEQMAD YLHSLAERFN R
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