Gene Pmen_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1791 
Symbol 
ID5109371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1964196 
End bp1965086 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID640503023 
Producthypothetical protein 
Protein accessionYP_001187287 
Protein GI146306822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.82082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTACCG CCGATCTGTT TCGCCTGCTG CTGCTTGCCG CCATCTGGGG CGCCAGCTTC 
CTGTTCATGC GCGTTGCCGC GCCGGCGCTG GGCAGCATGC CGACTGCCTT CTTTCGCGCC
AGCTTCGGCG CGCTGGGCCT GCTCGCACTG CTGGTGCTGC TGCGCAGCGA CTGGGACTTT
CGCGGCAAGC TGCGCATCTG CCTGGGGTTG GGGGTGATCA ACGCCGGCCT GCCTTCGGCC
ATGTACTGCC TGGCGGCGCT GATCCTGCCG GCCGGTTACT CGGCGATCTT CAACGCCACC
ACGCCCCTGA TGGGCGTACT GATCGGCGCC CTGTTCTTCC ATGAAGGCAT CACCCCGAGC
AAGGCGGCGG GCGTGTTTCT CGGCCTGCTC GGCGTGGCGG TGCTGACCCG CACCGGCCCG
GTGGCCTTCG ATCTGCAACT GCTGCTCGGT GCCGGCGCCT GCCTGGTGGC CACCACCTGC
TATGGCTTCG CCGGTTTTCT CACCCGCCGC TGGATCGGCC AGCAGGGCGG CCTGGACAAC
CGCCTGACCG CCTTCGCCAG TCTGGTCGGC GCCAGTGTGT TCCTGCTGCC GTTGTTCGCC
GGCAGCCTGG CGCTGCAACC GCCGCCGAGC TGGGGAGGCA TCGAGGTATG GCTGTCGCTG
GCCGCCCTCG GCCTGGTCTG CACGGCGTTC GCCTATGTCC TGTATTTCCG CCTGCTGGCG
GATATCGGGC CGATCAAGGC CAGCACCACC ACCTTTCTGA TACCGCCGTT CGGCGTCCTC
TGGGGCGCCC TGCTGCTGGG CGAACCACTC AGTTGGGACT ACCTGCCGGG CGGCGTGCTG
ATCGCGCTGG CCCTGTGGCT GGTGGTGCGG CCAGGAGCTG CCAAAGCATG A
 
Protein sequence
MRTADLFRLL LLAAIWGASF LFMRVAAPAL GSMPTAFFRA SFGALGLLAL LVLLRSDWDF 
RGKLRICLGL GVINAGLPSA MYCLAALILP AGYSAIFNAT TPLMGVLIGA LFFHEGITPS
KAAGVFLGLL GVAVLTRTGP VAFDLQLLLG AGACLVATTC YGFAGFLTRR WIGQQGGLDN
RLTAFASLVG ASVFLLPLFA GSLALQPPPS WGGIEVWLSL AALGLVCTAF AYVLYFRLLA
DIGPIKASTT TFLIPPFGVL WGALLLGEPL SWDYLPGGVL IALALWLVVR PGAAKA