Gene Pmen_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1788 
Symbol 
ID5109368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1960776 
End bp1961621 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID640503020 
ProductATPase 
Protein accessionYP_001187284 
Protein GI146306819 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCG AAGGCACCCA GTCCTACGTC GCCACCGACG ACCTCAAGCT CGCGGTCAAT 
GCCGCCATCA CCCTGCAGCG CCCGCTGCTG GTCAAGGGTG AGCCAGGTAC CGGCAAGACC
ATGCTCGCCG AGCAACTGGC CGAGGCCTTC GGCGCCAAGC TGATCACCTG GCACATCAAG
TCCACCACCA AGGCGCACCA AGGCCTGTAC GAATACGATG CGGTCAGCCG CCTGCGCGAT
TCGCAGCTCG ATTCCGACAA GGTTCACGAT GTTCGCAACT ACATCAAGAA GGGCAAGCTG
TGGGAGGCGT TCGAGTCCGA CGAGCGCGTG ATCCTGCTGA TCGACGAAAT CGACAAGGCC
GACATCGAGT TCCCCAACGA CCTGTTGCAG GAACTCGACA AGATGGAGTT CTACGTTTAC
GAGACCAACG AGACGATCAA GGCCAAGCAG CGCCCGATCA TCATCATCAC CTCGAACAAC
GAGAAGGAAC TGCCGGACGC CTTCCTGCGC CGCTGCTTCT TCCACTACAT CGCCTTCCCG
GACCGCGACA CCCTGAAGAA GATCGTCGAC GTGCACTACC CCAACATCAG CGGCGAACTG
GTGGCCGAGG CGCTGGATGT GTTCTTCGAC GTGCGCAAGG TGCCGGGCCT GAAGAAGAAG
CCTTCGACCA GCGAACTGGT GGACTGGCTC AAGCTGCTGA TGGCCGACAA CATCGGCGAA
GCCGTGCTGC GCGAGCGCGA CCCGACCAAG GCCATCCCGC CGCTGGCCGG TGCCCTGGTG
AAGAACGAGC AGGATGTGCA GCTGCTCGAG CGCCTGGCCT TTATGGCGCG CCGCGCTTCT
CGGTAA
 
Protein sequence
MKFEGTQSYV ATDDLKLAVN AAITLQRPLL VKGEPGTGKT MLAEQLAEAF GAKLITWHIK 
STTKAHQGLY EYDAVSRLRD SQLDSDKVHD VRNYIKKGKL WEAFESDERV ILLIDEIDKA
DIEFPNDLLQ ELDKMEFYVY ETNETIKAKQ RPIIIITSNN EKELPDAFLR RCFFHYIAFP
DRDTLKKIVD VHYPNISGEL VAEALDVFFD VRKVPGLKKK PSTSELVDWL KLLMADNIGE
AVLRERDPTK AIPPLAGALV KNEQDVQLLE RLAFMARRAS R