Gene Pmen_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1769 
Symbol 
ID5109349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1943537 
End bp1944391 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID640503001 
Productrhodanese domain-containing protein 
Protein accessionYP_001187265 
Protein GI146306800 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000405789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCG CTCAACTGAT CAGCGCGCCG CAGCTGCAGC AACGTCTCGG GCAGGAGGAT 
CTGCTGGTCC TCGACTGCCG CTTCGCCCTC GAGGACCCGG CCTACGGACG CCGCAGCTAC
CTCGACGGCC ATATCCCCCA GGCCCACTTT CTGGATCTCG AACAGGACCT GTCCGCCCCC
GTAATCAAGG GCGTGACCGG GCGCCACCCT CTGCCGGACC CGAGCGCGCT GGTCGAACGC
CTGCGAGCCT GCGGCCTGCG GGCGGACAGC GAGGTGGTGC TGTACGACGA CGGCCCCGGC
GCATTCGCCG CCCGCGCCTG GTGGCTACTG CTGTGGCTGG GCAAGCGCGA CGGTCTGTAC
CTGCTCGACG GGGGCCTGAA GGCCTGGCGC GAGGCCGGCC TGGAACTGAC GACAGCGCCG
CCGAGCAACG CCCCCGGCGA CTTCTCCGCA CAGCCCGACA ACAGCCTGCT GCTGAGCGCC
GAGCAACTGG CCCTGCGCCT AGGCAATCCG GACCTGACCC TGCTCGATGC TCGTGCCCTG
CCGCGCTTTC GGGGCGAGGT GGAACCGCTC GACCCGGTGG CCGGGCATAT CCCCGGCGCG
CAATGCGCGG CCTTCACCGA CAATCTCGGC GCCGATGGCC GCTTTCTGCC CTGCGCTGCC
CTGCGCGAGC GTTTCGACCA GTTGCGTGGG GAACGTCCGC TGGACAACCT GGCGGCCTAT
TGCGGCTCGG GCGTCACCGC CTGCCACAAC CTGTTCGCCA TGTGCCTGGC CGGGTACCCC
CTGGCACCGC TGTATGCCGG TTCTTGGAGC GAATGGATCA CCGATCCGCA GCGCCCCGTG
GCCACCGGCG ACTGA
 
Protein sequence
MSLAQLISAP QLQQRLGQED LLVLDCRFAL EDPAYGRRSY LDGHIPQAHF LDLEQDLSAP 
VIKGVTGRHP LPDPSALVER LRACGLRADS EVVLYDDGPG AFAARAWWLL LWLGKRDGLY
LLDGGLKAWR EAGLELTTAP PSNAPGDFSA QPDNSLLLSA EQLALRLGNP DLTLLDARAL
PRFRGEVEPL DPVAGHIPGA QCAAFTDNLG ADGRFLPCAA LRERFDQLRG ERPLDNLAAY
CGSGVTACHN LFAMCLAGYP LAPLYAGSWS EWITDPQRPV ATGD