Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1769 |
Symbol | |
ID | 5109349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1943537 |
End bp | 1944391 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640503001 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001187265 |
Protein GI | 146306800 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000405789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACTCG CTCAACTGAT CAGCGCGCCG CAGCTGCAGC AACGTCTCGG GCAGGAGGAT CTGCTGGTCC TCGACTGCCG CTTCGCCCTC GAGGACCCGG CCTACGGACG CCGCAGCTAC CTCGACGGCC ATATCCCCCA GGCCCACTTT CTGGATCTCG AACAGGACCT GTCCGCCCCC GTAATCAAGG GCGTGACCGG GCGCCACCCT CTGCCGGACC CGAGCGCGCT GGTCGAACGC CTGCGAGCCT GCGGCCTGCG GGCGGACAGC GAGGTGGTGC TGTACGACGA CGGCCCCGGC GCATTCGCCG CCCGCGCCTG GTGGCTACTG CTGTGGCTGG GCAAGCGCGA CGGTCTGTAC CTGCTCGACG GGGGCCTGAA GGCCTGGCGC GAGGCCGGCC TGGAACTGAC GACAGCGCCG CCGAGCAACG CCCCCGGCGA CTTCTCCGCA CAGCCCGACA ACAGCCTGCT GCTGAGCGCC GAGCAACTGG CCCTGCGCCT AGGCAATCCG GACCTGACCC TGCTCGATGC TCGTGCCCTG CCGCGCTTTC GGGGCGAGGT GGAACCGCTC GACCCGGTGG CCGGGCATAT CCCCGGCGCG CAATGCGCGG CCTTCACCGA CAATCTCGGC GCCGATGGCC GCTTTCTGCC CTGCGCTGCC CTGCGCGAGC GTTTCGACCA GTTGCGTGGG GAACGTCCGC TGGACAACCT GGCGGCCTAT TGCGGCTCGG GCGTCACCGC CTGCCACAAC CTGTTCGCCA TGTGCCTGGC CGGGTACCCC CTGGCACCGC TGTATGCCGG TTCTTGGAGC GAATGGATCA CCGATCCGCA GCGCCCCGTG GCCACCGGCG ACTGA
|
Protein sequence | MSLAQLISAP QLQQRLGQED LLVLDCRFAL EDPAYGRRSY LDGHIPQAHF LDLEQDLSAP VIKGVTGRHP LPDPSALVER LRACGLRADS EVVLYDDGPG AFAARAWWLL LWLGKRDGLY LLDGGLKAWR EAGLELTTAP PSNAPGDFSA QPDNSLLLSA EQLALRLGNP DLTLLDARAL PRFRGEVEPL DPVAGHIPGA QCAAFTDNLG ADGRFLPCAA LRERFDQLRG ERPLDNLAAY CGSGVTACHN LFAMCLAGYP LAPLYAGSWS EWITDPQRPV ATGD
|
| |