| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1767 |
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| Symbol | |
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| ID | 5109347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1941443 |
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| End bp | 1942717 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502999 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001187263 |
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| Protein GI | 146306798 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0166103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAAC GTCTTCTCAA GACCGGTCTG GCCGTTGCCA TCACCGCCAC TTCGAGCCAT
GGCCTGGCCA GCGGCTTCGC CCTCAACGAG CAAAGCATTT CCGGCATGGG TACCTCCTTC
GCCGGTCGCT CCTCCTCGGC CGATGACGCC AGCACCGTAT TCGGCAACCC GGCCGGCATG
GCGCGCCTCA AGCGCGACGA GATCTATGTC GGTGCCGCCG TCATCCACGC CAAGAGCGAC
ATCCGCAACG CCAGCGCCAA CGCCGGCCCG CTGCAGCTGT CCGGCAGCAA TGACGGCGAT
ATGGTGCCGT CCACCGGCGT GCCCATGGGT TACTACGTCA AGCCGCTGGA CGACAAGGTC
GCCTTCGGCC TGGGCGTCTA CGTGCCCTTC GGCCTGATGA CCGATTACGA GCGCGGCTTC
CAGGGCCGCT ATCACGCCGA CAAGAGCTAC GTACGCGTGA TCACCGTGCA GCCGACCCTG
AGCTACCGCT TCAACGACAA GCTGTCGGTC GGTTTCGGCC CCACCTTCAA TCACATCGAA
GGCGAACTCA GTTCCTCGAT ACTCAACCCG CTGAGCCCCG GCAGCAACGA CGGCAAGGTG
AAGGTCAAGG GCGACGATAC CGCGGTAGGC TTCAATGTCG GGGTGCTCTA CGAGTTCACT
CCCGGCACCC GCGCCGGCAT TACCTACCAC TCGCGCGTGA AGTACGAACT GGAAGGCGAT
ACCCGCGTTT CCGGCAGCGG CATTCTGGCT GGCGTAGCGG GCAAGTACGA CGCCAACCTG
GATCTGACCA CCCCGGAATC GGTGGACATG TCCATCACCC ATGAGCTGAA CGACGCCTGG
ACCCTGTACC TGGGCAGCAC CTGGACACGC TGGAGCCGCT TCAAGGAAAT CCGCGTGGAG
AACGATGCCG CCACGCTGCC GGCCAACCTC GCCACCATCG TCGAGGAGCA GAACTGGCAC
GACACCTGGG CCCACGCGAT CGGCCTGTCC TACAAGCTCA ATCCGCAATG GACCCTGCGT
ACGGGCATGG CCATCGACCA GTCGCCGATC AACAACGTCG ACCGCTCGCC GCGCGTCCCG
TCGGGTGACC GCACCATCTT CAGCGTCGGC GCCGGCTGGA GTCCGAACCA GGACATGACC
ATCGACCTGG CCTATTCCTA CCTGCAGGAA GAGTCGGTGG ACGTCAACCA CGCCAGCGAT
ACCCGTGGCA CCTACCGTGC GCGCTACAAG AACCGCGCCC ACGGCCTGGG CGCCTCGCTC
AGCTATCGCT TCTAA
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| Protein sequence | MSKRLLKTGL AVAITATSSH GLASGFALNE QSISGMGTSF AGRSSSADDA STVFGNPAGM
ARLKRDEIYV GAAVIHAKSD IRNASANAGP LQLSGSNDGD MVPSTGVPMG YYVKPLDDKV
AFGLGVYVPF GLMTDYERGF QGRYHADKSY VRVITVQPTL SYRFNDKLSV GFGPTFNHIE
GELSSSILNP LSPGSNDGKV KVKGDDTAVG FNVGVLYEFT PGTRAGITYH SRVKYELEGD
TRVSGSGILA GVAGKYDANL DLTTPESVDM SITHELNDAW TLYLGSTWTR WSRFKEIRVE
NDAATLPANL ATIVEEQNWH DTWAHAIGLS YKLNPQWTLR TGMAIDQSPI NNVDRSPRVP
SGDRTIFSVG AGWSPNQDMT IDLAYSYLQE ESVDVNHASD TRGTYRARYK NRAHGLGASL
SYRF
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