| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1726 |
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| Symbol | |
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| ID | 5109306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1901995 |
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| End bp | 1903053 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502957 |
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| Product | DNA polymerase IV |
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| Protein accession | YP_001187222 |
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| Protein GI | 146306757 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000164893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.305741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC GAAAAATCAT CCACATCGAC TGCGACTGCT TCTACGCCGC CATCGAGATG
CGTGACGACC CGAGCCTGGC CAATCGTCCG CTGGCCGTCG GTGGTTCGGC GGACCGTCGC
GGGGTAATCG CCACCTGCAA TTACGAGGCG CGTGCCTACG GCGTGCGCTC GGCGATGTCG
TCGCGGCATG CATTGAAGCT GTGTCCGGAC CTGCTGATCG TCAAACCGCG CTTCGAGGTG
TACCGCTCGG TGTCGCGGGA GATTCACGGC ATCTTTCGCC AGTTCACCGA TCTGATCGAG
CCGCTGTCGC TGGATGAGGC CTATCTGGAC GTGAGCGATT CGCCGCATTT CGCCGGCAGC
GCCACGCGCA TCGCCCAGGA GATTCGTCGG CGTGTGGCGC AGGAGCTGCA CATCACGGTG
TCGGCCGGGG TGGCGCCGAA CAAGTTCCTG GCCAAGATCG CCAGCGACTG GCGCAAGCCC
AACGGGCTTT TCGTGATCAC CCCCGATCAG GTGGACGAGT TCGTCACGGC GTTGCCGGTA
AGCAAGCTGC ACGGGGTCGG CAAGGTCACG GCGGACAAGC TGACGCGCTT AGGGATTCGT
ACCTGTCTGG ACCTGCGGGA CTGGAACAAG CTGGCGCTGG TGCGCGAGTT CGGCAGTTTC
GGCGAGCGCC TTTGGCGTCT GGCCCATGGC ATCGACGAAC GCGAGGTCAA GGTCGACAGC
CGCCGCCAGT CACTTAGTGT GGAGCACACC TACGACCAGG ATCTGCCCGA CCTGCAGAGC
TGCCTGGAGA AACTGCCGGC CCTGCTCGAA GAGATGAACG GCCGCCTGCA GCGCCTGGAT
GCCAGCTACC GGCCGGACAA GCCCTTCGTC AAGGTCAAGT TCCATGACTT CACCCAGACC
ACCCTGGAGC AGGCGGGGGC CAGTCGCGAT CTGGACAGTT ATCGGCAGTT GCTGGCCAGT
GCCCATGCCC GTGGCGACAA GCCGGTGCGC CTGCTCGGAG TGGGGGTCAG GCTGCATGAC
TTGCGTGGGC GGCAGGAGCA GCTGGAGCTG TTCGCCTAG
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| Protein sequence | MKQRKIIHID CDCFYAAIEM RDDPSLANRP LAVGGSADRR GVIATCNYEA RAYGVRSAMS
SRHALKLCPD LLIVKPRFEV YRSVSREIHG IFRQFTDLIE PLSLDEAYLD VSDSPHFAGS
ATRIAQEIRR RVAQELHITV SAGVAPNKFL AKIASDWRKP NGLFVITPDQ VDEFVTALPV
SKLHGVGKVT ADKLTRLGIR TCLDLRDWNK LALVREFGSF GERLWRLAHG IDEREVKVDS
RRQSLSVEHT YDQDLPDLQS CLEKLPALLE EMNGRLQRLD ASYRPDKPFV KVKFHDFTQT
TLEQAGASRD LDSYRQLLAS AHARGDKPVR LLGVGVRLHD LRGRQEQLEL FA
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