Gene Pmen_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1708 
Symbol 
ID5109682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1876979 
End bp1877404 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID640502937 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001187204 
Protein GI146306739 
COG category[R] General function prediction only 
COG ID[COG3607] Predicted lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.129026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAC GCATCAGTCT GATCACCCTG GCCGTCGACG ACCTCGAGCG CAGCCTGAGC 
TTCTATCGCG ACGGCCTCGG CCTCCCCAGC GAAGGCATAG TCGGACGCGA GTTCGAACAT
GGCGCGGTGG CCTTCTTCGA CCTGCAAGGC GGGCTGAAAC TGGCCCTCTG GCCTAGCACC
AGCCTGGCCC ACGACAGCGG CCTGCGCTGC CCGGAAAACG CTGCGGGCGC CTTCTGCCTG
GCGCACAACC TGGACAGCCG TGAGGCGGTG GACGCGCTGA TGGAGCGAGC CCGCCTGGCC
GGTGCGCATG TCCGCAAGCC GCCACAGGAC ACCTTCTGGG GCGGCTACGG CGGCTATTTC
CAGGACCCGG ACGGCCACCT CTGGGAGCTT GCCTACAATC CGCAGCTGCT GGCGGATGCT
CGATAA
 
Protein sequence
MQPRISLITL AVDDLERSLS FYRDGLGLPS EGIVGREFEH GAVAFFDLQG GLKLALWPST 
SLAHDSGLRC PENAAGAFCL AHNLDSREAV DALMERARLA GAHVRKPPQD TFWGGYGGYF
QDPDGHLWEL AYNPQLLADA R