Gene Pmen_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1702 
Symbol 
ID5109676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1873503 
End bp1873913 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content66% 
IMG OID640502931 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001187198 
Protein GI146306733 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0946955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC GTCCGTCCCG TCTCAACGGC CTGCGCCACC TGGCTCTGCT GGTGCCCAAC 
CTGGAGGAGT GCGAGCGCTT CTATGTTGAG GTGCTGGGCA TGCAGGTGCT GCATCGCGCC
AACGAGGATC TGGTCTATCT GACCTGCGGC AACGACAACC TCTCCCTCGG CCGCGCCTAT
GCCGAGAGTC ACGGCGTGCC GCTGGTCGAT CATTACGGCT TCATCGTCGA CAGCGTCGAG
GAGCTGGAGG CCTGGTACCA CTACCTCCAG GCGCGTGGGG TGACGTTGCT GGATCGCCCC
TTCGATCACG GCGACGGGGC GCGCAGCTTC CATCTGCTCG ACCCGGCCGG CAACAAGGTG
CAGCCGCTGT ACCACCCCGC GCTATCGGGG CAGCGCTTCA GCCAGCGGTA A
 
Protein sequence
MLDRPSRLNG LRHLALLVPN LEECERFYVE VLGMQVLHRA NEDLVYLTCG NDNLSLGRAY 
AESHGVPLVD HYGFIVDSVE ELEAWYHYLQ ARGVTLLDRP FDHGDGARSF HLLDPAGNKV
QPLYHPALSG QRFSQR