Gene Pmen_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1694 
Symbol 
ID5109668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1862655 
End bp1863287 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID640502923 
ProductDSBA oxidoreductase 
Protein accessionYP_001187190 
Protein GI146306725 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.274727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCC GCCTGCTCTA CGTGATGGAC CCGATGTGCT CCTGGTGCTG GGGTTTCGCA 
CCCGTGGTCG AAGCCCTCGC CGAGCAGGCG GCTGCGGCCG GCGTGCCGCT GCAGATCGTG
GTGGGTGGCC TGCGCCGCGA TCAGGTGGCG ATCGATGCGG CAGCGCGGGT GCGTTACCTG
GGCTACTGGC AGGCGGTCAA CGCCAGCACC GGGCAGCTGT TCGACTTCGA CCACGGCCTG
CCCGAGGGCA TGGTGTACGA CACCGAGCCG GCCTGCCGCG CGCTGGTCAC CGCACGCCAG
CTCGATGCGC CCAGCGCCTG GACCCTGCTC AAACTGATCC AGCAGGCCTT CTACACCGAG
GGTGCGGATG TCACCCAGGC CAGCGTGCTG GTGGAGTTGG CCGAGCGGGC CGGCATTCCG
CGTATCGAAT TCGCCGAGGC CTTCGACAGC CAGGCCATCG TTGATGCTAC CGCTGCCGAT
TTCGCCTGGG TGCAGGATCT GGGCATCGCC GGTTTCCCCA CCTTGCTGGC CGAGCGCGAT
GGCCAGCTGG CGCTGCTGAC CAACGGCTAT CAGCCGCTCG AGGCGCTTTC GCCGCTGCTG
GAACGCTGGC TGGAGCGCGC TGCCAATGCC TGA
 
Protein sequence
MASRLLYVMD PMCSWCWGFA PVVEALAEQA AAAGVPLQIV VGGLRRDQVA IDAAARVRYL 
GYWQAVNAST GQLFDFDHGL PEGMVYDTEP ACRALVTARQ LDAPSAWTLL KLIQQAFYTE
GADVTQASVL VELAERAGIP RIEFAEAFDS QAIVDATAAD FAWVQDLGIA GFPTLLAERD
GQLALLTNGY QPLEALSPLL ERWLERAANA