Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1633 |
Symbol | tmk |
ID | 5109291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1796076 |
End bp | 1796708 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502861 |
Product | thymidylate kinase |
Protein accession | YP_001187129 |
Protein GI | 146306664 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGTC TGTTTATTAC CCTGGAAGGC CCGGAAGGCG CTGGCAAAAG CACCAACCGC GAATATCTGG CCGAGCGCCT GCGCGAGCAG GGCGTCGACG TAGTGCTGAC CCGTGAACCC GGCGGCACAC CGCTGGCCGA GCGTATCCGC GAGCTGCTGC TCGACCCCAG CGACGAGCCG ATGGCGGCCG ATACCGAGCT GCTGCTGGTG TTCGCCGCGC GTGCTCAGCA CCTGCAGCAG GTCATTCGCC CGGCTTTGGC CAAGGGCTGT GTGGTGCTGT GCGACCGTTT TACCGATGCC ACCTATGCCT ATCAGGGCGG CGGGCGAGGA CTGTCCATCG AGCGCATTGC GCAGCTGGAG CAGTTCGTCC AGGGCGAGCT GCGTCCCGAC CTGACGCTGA TTTTCGATCT GCCGGTGGAA GTCGGTCTGG CTCGCGCCGC GGCGCGCGGG CGCCTGGACC GTTTCGAGCA GGAAGGCCGT GGCTTCTTCG AAGCGGTACG CCAGGCTTAC CTGCAGCGCG CCGTGCAGGC GCCACAACAT TATCGCGTGC TGGATGCCGG ACAGACCCTG GCTCAGGTGC AGGCCGATAT CGACGCCTTG CTGCCGAGCC TGCTGGAGGC CTGCCGTGGC TGA
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Protein sequence | MTGLFITLEG PEGAGKSTNR EYLAERLREQ GVDVVLTREP GGTPLAERIR ELLLDPSDEP MAADTELLLV FAARAQHLQQ VIRPALAKGC VVLCDRFTDA TYAYQGGGRG LSIERIAQLE QFVQGELRPD LTLIFDLPVE VGLARAAARG RLDRFEQEGR GFFEAVRQAY LQRAVQAPQH YRVLDAGQTL AQVQADIDAL LPSLLEACRG
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