| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1627 |
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| Symbol | |
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| ID | 5109285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1790665 |
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| End bp | 1791603 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502855 |
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| Product | [Acyl-carrier-protein] S-malonyltransferase |
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| Protein accession | YP_001187123 |
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| Protein GI | 146306658 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.863996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT CCCTCGCATT CGTCTTTCCC GGTCAGGGTT CGCAATCCCT GGCCATGCTC
GCCGAGCACG GTGCCCAGCA GCAGCTGGTG CTCGATACTT TTGGCGAAGC CTCCGAAGCG
CTCGGCTACG ACCTCTGGGC GCTGACTCAG CAAGGTCCGG AAGAGCAGCT GAACCAGACC
GACAAGACCC AGCCGGCCAT CCTCACCGCC TCCATCGCCC TGTGGCGTCT GTGGCAGGCC
GAGGGCGGCG CCAAGCCGGC CTTCGTCGCC GGCCACAGCC TGGGTGAATA TTCCGCGCTG
GTCGCCGCGG GCAGCATCTG CTTTGCCGAT GCCGTGAAGC TGGTGGAGCG CCGCGGTCAA
CTGATGCAGC AGGCCGTTCC GGCCGGGCAG GGCGGCATGG CCGCCATCCT CGGTCTGGAA
GATGCCGACG TGCTGGCTGC CTGCGCCGAA GCCGCGCAGG GTGATGTGGT CAGCGCGGTG
AACTTCAATG CCCCCGGTCA GGTGGTGATC GCCGGTAGCG CGGCTGCCGT CGAACGCGCC
ATCGAAGCAT GCAAGACGCG TGGTGCCAAG CGCGCCATGG CGCTGCCGGT CAGCGTGCCG
TCGCACTGTG CGCTGATGAA GCCTGCTGCC GAGCGTTTCG CTGAGTCGGT CGAGGCGCTG
AACTGGCAGG CGCCGCAGAT CCCGCTGGTG CAGAACGTCA GCGCCGCCGT GGTGTCCGAC
CTGGCCACCC TGAAGGCCGA CTTGCTGGCG CAGCTGTACA GCCCGGTTCG TTGGGTCGAG
TCCATGGTGC GTCTGTCCGA GCAGGGCGTG ACCGATCTGG TCGAGTGCGG CCCGGGCAAG
GTGCTCAGCG GCCTGAACAA GCGCTGCGTC AAAGGCATCA ACACCCACAA TCTGGACACC
CCCGACGCTT TCGCCGCTGC GCGTGCAGCC CTGGCCTGA
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| Protein sequence | MSASLAFVFP GQGSQSLAML AEHGAQQQLV LDTFGEASEA LGYDLWALTQ QGPEEQLNQT
DKTQPAILTA SIALWRLWQA EGGAKPAFVA GHSLGEYSAL VAAGSICFAD AVKLVERRGQ
LMQQAVPAGQ GGMAAILGLE DADVLAACAE AAQGDVVSAV NFNAPGQVVI AGSAAAVERA
IEACKTRGAK RAMALPVSVP SHCALMKPAA ERFAESVEAL NWQAPQIPLV QNVSAAVVSD
LATLKADLLA QLYSPVRWVE SMVRLSEQGV TDLVECGPGK VLSGLNKRCV KGINTHNLDT
PDAFAAARAA LA
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