| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1617 |
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| Symbol | |
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| ID | 5109275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1780238 |
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| End bp | 1780702 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502845 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_001187113 |
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| Protein GI | 146306648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.11326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.164412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCC TGTTCGTTTG TCTGGGCAAC ATCTGCCGTT CGCCCACGGC TGAAGGCGTT
TTCCGTCACA AGCTGCGTGC GGCAGGGCTG GAAGACCGGG TGCAGGTGGA TTCCGCCGGC
ACCGGCGACT GGCACGTCGG CAAGGCGCCG GACAGTCGCA CACGGCAGGC GGCGCTGCGC
CGCGGCTATG ATCTGTCAGC ACAACGTGCG CGCCAGGTCG AGGCCGCCGA TTTCCAGCGC
TTCGACCTGA TCCTGGCCAT GGATCAGAGC AATTTGCGCA ACCTCAAGGC GCTGCGCCCG
GCAGATGCCC GCGCCGATCT GGATCTGTAC CTGCGCCGCT ATGAACTGGC GCTGGACGAG
GTGCCCGACC CGTACTACGG CGGCGAGGAA GGCTTCGAGC AGGTGCTGGA CCTGATCGAG
CAGGCCAGCG ACGCCCTGCT CAATGAGATC AAGGGGCGCC TGTGA
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| Protein sequence | MKVLFVCLGN ICRSPTAEGV FRHKLRAAGL EDRVQVDSAG TGDWHVGKAP DSRTRQAALR
RGYDLSAQRA RQVEAADFQR FDLILAMDQS NLRNLKALRP ADARADLDLY LRRYELALDE
VPDPYYGGEE GFEQVLDLIE QASDALLNEI KGRL
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