| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1613 |
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| Symbol | |
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| ID | 5109271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1777835 |
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| End bp | 1778263 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502841 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001187109 |
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| Protein GI | 146306644 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.921592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.194939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAATTCC GGCGCAAACC GCGGGAGAAC GTCGAGATCA ACCTGGCCTC GTTGATCGAC
GTGGTATTCA TCCTGCTGCT GTTCTTCGTG GTCACCACCA CCTTCACCCG CGAGACTCAG
CTCAAGGTCG ACCTGCCCGA GGCGGCCAGC GGCACGCCGC CGGAGCAGAC CGAGCTCAAG
CAGGTGGAGG TGCTGATCGG TGCCGATGGC GCGTTTTCGG TCAACGGCAA GGCGCTGCTG
GAGAGCAACC TGAGCAACCT CATGGCTGCC CTGCAGAAGG AGTCCGACGG CGACAACAGC
CTGCCGCTGA TCATCAGCGC CGACGGCAAG ACGCCGCACC AGGCGGTGAT CACCGCCATG
GACGCCGCCG GCAAGCTGGG CTTCTCGCAC CTGCGCATCA CCACGGTGGA AGCACAGGAA
AATCCTTAA
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| Protein sequence | MKFRRKPREN VEINLASLID VVFILLLFFV VTTTFTRETQ LKVDLPEAAS GTPPEQTELK
QVEVLIGADG AFSVNGKALL ESNLSNLMAA LQKESDGDNS LPLIISADGK TPHQAVITAM
DAAGKLGFSH LRITTVEAQE NP
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