| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1601 |
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| Symbol | |
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| ID | 5109259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1766108 |
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| End bp | 1767133 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502829 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001187097 |
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| Protein GI | 146306632 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0279572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0160847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCTG CTGTACTCCA GCCCGTTATC GCTGTCGCCC TGGCGGCAGC CCTAACGGGC
TGCTTGCATT CTGAACGGAT CGAAGAGTTC GGTGGCCCAA CCATGGGCAG CACCTATTCG
GTCAAATATG TCCGCAGTGA AGGTGTTGCG CCGCAAGCCG AACTCAAGGC GGCGACCGAG
GCGATCCTCG CCGAGATCGA TCTGCAGATG TCCACCTATC GCGATGATTC GCTGATCGAG
CAATTCAACC GTGCGCCAGC GGGTACCTGC CAGGCCATGC CCAAGGGCGT GCTGGATCTG
GTGCGTGCCG GTGATCGTCT GCACCAGGAG AGTCAGGGTT ATTTCGACCT GACGCTGGAA
CCCTTGCTCG ACCTCTGGGG CTTCGGCCCC AAAGGGCAGG GCGAGGCCGT GCCGGACGCT
GAACGCCTGG CCGAAGTGCG TCAGCGCGTT GGTCAACAGC ACCTGAAGAT CGACGGCGAG
CAGCTGTGCA AGGATGCTGA TGTTCAGGTC GACTTCAACA GCATCGCGGC CGGTTACGCC
GTCGATCTAA TCGTCGAGCG TCTGGGCGAA CTGGGCGTCA CCAGTTATCT GGTCGAGGCC
ACCGGTGAGC TCAAGGCGGC CGGTTTCAAG CCCGATGGCA GCCACTGGCG CATCGGCCTG
GAAGCCCCGC GCGACGACCA GCGGGTGGCC CAACGCATTC TGCAGCTCAA TGGTTACGGT
ATCTCCACCT CAGGTGACTA CCGCAACTAC TTCGAAGAGA ACGGCCAGCG CTACTCGCAT
ACGCTCGATC CGCTGAGCGG CAAGCCGGTC AACCACAAGC TGGCGGCGGT GACGGTGGCA
GATCCATCGA CCTTGCGCGC CGATGGCTTG TCTACCCTAT TGATGGTGCT TGGGCCGGAT
GCCGGTATGG CCTTCGCCCA GCGCAACGGT ATCGCGGCTT TTTTCGTGAC GCGTGAGGGC
GAGGGCTTCG TCACACAGGG CACGACCGCA TTCGAGCAGC TATTCGCTGC AGGAGATGAG
CAATGA
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| Protein sequence | MRSAVLQPVI AVALAAALTG CLHSERIEEF GGPTMGSTYS VKYVRSEGVA PQAELKAATE
AILAEIDLQM STYRDDSLIE QFNRAPAGTC QAMPKGVLDL VRAGDRLHQE SQGYFDLTLE
PLLDLWGFGP KGQGEAVPDA ERLAEVRQRV GQQHLKIDGE QLCKDADVQV DFNSIAAGYA
VDLIVERLGE LGVTSYLVEA TGELKAAGFK PDGSHWRIGL EAPRDDQRVA QRILQLNGYG
ISTSGDYRNY FEENGQRYSH TLDPLSGKPV NHKLAAVTVA DPSTLRADGL STLLMVLGPD
AGMAFAQRNG IAAFFVTREG EGFVTQGTTA FEQLFAAGDE Q
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