Gene Pmen_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1566 
Symbol 
ID5109224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1725089 
End bp1725598 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID640502794 
Productputative CheW protein 
Protein accessionYP_001187062 
Protein GI146306597 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.173837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.497426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTC TATCCGCCAG CCATCAGGTG GCCCCGCCGG ACAGCGTGCA GCACCTGTCG 
TTTCGCGTGC GGGACGCGCG CTACGCCCTG CCAATCGAAT TGGTGCGGGA AATCATCGAG
TACGGCCAGG TGACCACGGT GCCGATGATG CCGAGCTTCA TCCACGGCGT GATCAACCTG
CGCGGCAACG TGGTGCCGGT GCTGGATCTG GCCGCCCGCT TCGGCTTCGA GCTGACCCAG
CCGGGCAAGC GCACCTGCAT CGTGATCATC GAGCTGAACC TGGACGAGCA GCAGCAACGC
ATCGGCCTGG TGGTCGATGC GGTCGACGCG GTGCTCGACA TCGAGCCGGG TGAAGTCGAG
CAGGCGCCAC CGTTCGGCGC CGGCATCCGT ACCGACTTCA TCGCCGGCAT GGCCCGGGAC
AATGGCGGTT TCACCATCAT CATCGACGTG CGGCGGGTGC TGTCGCTCGA CGATATCCGC
CAGTTGAGCC TCGCCCAGCA GGCCAGTTGA
 
Protein sequence
MNGLSASHQV APPDSVQHLS FRVRDARYAL PIELVREIIE YGQVTTVPMM PSFIHGVINL 
RGNVVPVLDL AARFGFELTQ PGKRTCIVII ELNLDEQQQR IGLVVDAVDA VLDIEPGEVE
QAPPFGAGIR TDFIAGMARD NGGFTIIIDV RRVLSLDDIR QLSLAQQAS