| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1557 |
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| Symbol | |
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| ID | 5108507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1714475 |
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| End bp | 1715509 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502785 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187053 |
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| Protein GI | 146306588 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0820783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACC TCGGCTACAC CTCGGTTCCC GCCCTGCTCA AGTACCTGCG CCAGGCCGAA
CAGCTCGGTC TGGATATCGA CCGTGCGCTG GCGGCCGCCG GCGTTCAGGC GCAGGATCTG
GCCGACAACG GCAAGCGGAT TCCCAGCGAG GTGCACGAAC GCCTGCTGGC GCATCTGCTG
GAGGTGTCCG GCGACCCGCT GTTCGGCCTG CACGCCGCGC GTTTCGTGCA GCCCGGTTCG
TGGAGCGTGC TCGGTTACAT CGCCATGAAC TGCGCCACCC TGGGTGAGGC CATGGGCCGC
ATCGTGCCGT ACGAGAAACT GGTGGGCGAC ATGGGCACCA GCCGTCTCGA AGCCGCCGAG
GATCACGTGC GGCTGATCTG GAGTTGTCGC CATCAGGCGC CGCAGGTGCG CCGGCACATG
GTGGAGAACG TGCTCGCCTC CTGGCTGCTG TACGCACGCT GGATCGCCGA CTCCGAGCAT
TCGCCGCGCG AAGCCTGGTT CGAGCACGCG CAACCGGCCG GCACCGAGCT GGAGGAATAC
CAGGCGCTGT TCGGCTGCCC GGTATTGTTC GAGCAACCCT GCAACGCCCT GCTGGTGCCG
CTGGACTATC TCGGCGTGCC GCTGCGCCAG GCCGATGCCA ACCTGCTGCG CACCCTGGAG
GAACACGCTC TGGCGCTGAT GGCCGGGCTG GACGAGGACG AGCCGCTGCC GCGACGGGTG
AAGAACGCCC TGCGCCTGCT GCTCAAGGAC GGCCTGCCGC GCAAGGAACG GGTGGCGGAG
AAGTTCGACA TGACCGTGCG CACCCTGCAG CGCCACCTGC AGCAGGCCGG CACCAGCTAC
CAGCAGATCC TCGACGAGCT GCGTCAGGAA CTGGCCGAGC ACTACCTGCT GCGCAGCGAC
CTGGCGATCC AGGACATCGC CTGCTACCTC GGCTTCACCG AGGCACGCTC CTTCCACCGC
AGCTTCAAGG GCTGGACCGG GCAGACGCCG GGCGAATTTC GCGAAAGCCG GCGCAGGGAC
AATCCGCTGG GTTAG
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| Protein sequence | MENLGYTSVP ALLKYLRQAE QLGLDIDRAL AAAGVQAQDL ADNGKRIPSE VHERLLAHLL
EVSGDPLFGL HAARFVQPGS WSVLGYIAMN CATLGEAMGR IVPYEKLVGD MGTSRLEAAE
DHVRLIWSCR HQAPQVRRHM VENVLASWLL YARWIADSEH SPREAWFEHA QPAGTELEEY
QALFGCPVLF EQPCNALLVP LDYLGVPLRQ ADANLLRTLE EHALALMAGL DEDEPLPRRV
KNALRLLLKD GLPRKERVAE KFDMTVRTLQ RHLQQAGTSY QQILDELRQE LAEHYLLRSD
LAIQDIACYL GFTEARSFHR SFKGWTGQTP GEFRESRRRD NPLG
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