| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1471 |
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| Symbol | |
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| ID | 5109760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1631570 |
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| End bp | 1632994 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502700 |
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| Product | protease Do |
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| Protein accession | YP_001186968 |
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| Protein GI | 146306503 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATC TCAAATCCGT AACGCCGCTG CTGATGGCAG CGCTGCTCTG GGGGCAGAGT
CTGCTGGCCC AGGCCAGCCT GCCGGACTTT ACCGCTCTGG TTGAGGAGGC CTCGCCTGCG
GTGGTCAACA TCAGTACTCG TCAGAAAATG CCGGAGCGCT CCGTGGCTGC TCAGCCCGGG
CTGCCCGATC TGGAAGGCCT GCCGCCAATG TTCCGCGAGT TCTTCGAGCG CAGCATTCCG
CAGATGCCGC GCAATCCGGG CGGTCGTCAG CGTGAAGCGC AGTCGCTGGG TTCCGGCTTC
ATCATCTCCG CCGATGGTTA CGTGCTGACC AACAATCATG TGGTGGCCGA TGCCGATGAG
ATCATCGTGC GCCTGTCTGA CCGCAGCGAG CTGGAGGCCA AGCTGATCGG CGCCGATCCG
CGCAGCGACG TGGCACTGCT CAAGGTCGAG GGCAAGGGGC TGCCCACCGT GCGTCTGGGC
AAGTCCGACG AACTCAAGGT CGGCGAATGG GTACTGGCCA TCGGCTCGCC TTTCGGTTTC
GATCATTCGG TGACCGCCGG TATCGTCAGC GCCAAGGGGC GCAACCTGCC GAGCGACAGC
TACGTGCCCT TCATCCAGAC CGATGTGGCG ATCAACCCCG GCAACTCCGG CGGGCCACTG
TTCAACCTCA AGGGCGAGGT GGTCGGCATC AACTCGCAGA TCTTCACCCG CTCGGGCGGC
TTCATGGGCC TGTCCTTCGC CATCCCGATG GAAGTGGCCC TGCAGGTTTC CGAACAGCTC
AAGGCCGACG GCAAGGTCAC TCGCGGCTGG CTCGGCGTGG TCATCCAGGA AGTGAACAAG
GACCTGGCCG AGTCCTTCGG CCTGGATCGC CCGGCTGGTG CCCTGGTGGC GCAGGTGCTG
GAAGATGGTC CGGCGGACAA GGGCGGTCTG CAGGTTGGCG ACGTGATTCT CAGTCTCAAC
GGCAAGCCGA TCGTCATGTC GGCGGATTTG CCGCATCTGG TCGGTGGCCT CAAGCCGGGC
GAGAAGGCCG AGATGGACGT GGTGCGTGAC GGCTCGCGCA AGAAGCTCAA GGTGACCATT
GGCACCTTGC CGGAAGAAGG TCAGGAACTG GCTGCTGCCG GTTCGACCAA GGGGGGCGAG
CGCAGCAGCA ACCGCCTGGG TGTGACGGTG GTCGAGCTGA CCGCCGAGCA GAAGAAGGGC
CTGGACCTGC GCGGTGGCGT GGTGGTCAAG GAAGTGCTCA GCGGTCCGGC GGCCATGATC
GGTCTGCGAC CGGGCGATGT GATCACGCAC CTGAACAACC AGGCCATCGA TTCGACGGCC
ACCTTCGCCA AGGTGGCGCA GGAGCTGCCG AAGAACCGTT CGGTGTCGAT GCGCGTGCTG
CGTCAGGGGC GCGCCAGCTT CATCACCTTC AAACTGGCCG AGTAA
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| Protein sequence | MRNLKSVTPL LMAALLWGQS LLAQASLPDF TALVEEASPA VVNISTRQKM PERSVAAQPG
LPDLEGLPPM FREFFERSIP QMPRNPGGRQ REAQSLGSGF IISADGYVLT NNHVVADADE
IIVRLSDRSE LEAKLIGADP RSDVALLKVE GKGLPTVRLG KSDELKVGEW VLAIGSPFGF
DHSVTAGIVS AKGRNLPSDS YVPFIQTDVA INPGNSGGPL FNLKGEVVGI NSQIFTRSGG
FMGLSFAIPM EVALQVSEQL KADGKVTRGW LGVVIQEVNK DLAESFGLDR PAGALVAQVL
EDGPADKGGL QVGDVILSLN GKPIVMSADL PHLVGGLKPG EKAEMDVVRD GSRKKLKVTI
GTLPEEGQEL AAAGSTKGGE RSSNRLGVTV VELTAEQKKG LDLRGGVVVK EVLSGPAAMI
GLRPGDVITH LNNQAIDSTA TFAKVAQELP KNRSVSMRVL RQGRASFITF KLAE
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