| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1411 |
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| Symbol | |
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| ID | 5109700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1574539 |
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| End bp | 1575738 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502640 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_001186908 |
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| Protein GI | 146306443 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.997998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA GCATCTTCGC CGAACGGATC GTGCAGAACC TGCTCGACAC CGACTTCTAC
AAGCTGACCA TGATGCAGGC GGTGCTGCAC AACTACCCCA ACGCCGAGGT GGAATGGGAG
TTCCGCTGCC GCAGCAGCGA GGACCTGACG CCCTACCTGG CCGAAATTCG CTACCAGATC
GAGCGCCTGA GCGAGCTGAG CATCACTGCG GACCAGCTCG CCTTTCTCGA GCGCATCCCG
TTCATCAAGC CCGACTTCAT CCGCTTTCTC AGCCTGTTCC GCTTCAACCT GCGCTACGTC
CACACGGGCA TCGAAGACGG CCAGTTGAGC ATTCGCCTGC GCGGCCCCTG GCTGCACGTG
ATCCTCTTCG AGGTGCCGCT GCTGGCCATC GTCAGCGAAG TGCGCAACCG CTATCGCTAC
CGCGAGGTAC TGCTGGAGCA GGCTGCCGAG CGCCTCTACC AGAAGCTCGA CTGGCTGCGC
GCCGAGGCCA GCGAGGACGA GCTGGCCGGC TTCCAGCTCG CCGACTTCGG CACCCGCCGG
CGCTTTTCCT ACCGCGTGCA GGAACAGGCG GTGCACATCC TCAAGCGTGA TTTCCCCGGG
CGTTTCGTCG GCACCAGCAA CGTGCACCTG GCCCGCGAGT TCGACCTCAA ACCCATCGGC
ACCATGGCCC ACGAATGGCT GATGGCGCAC CAGCAACTGG GCCCCAGGCT GATCGACAGC
CAGATAGCCG CCCTCGATTG CTGGGTGCGC GAATACCGCG GCCAGCTGGG TATCGCCCTG
ACCGACTGCA TCACCATGGA TGCCTTCCTG GCCGACTTCG ACCTGTATTT CGCCAAGCTT
TTCGACGGCC TGCGCCACGA TTCCGGCGAC CCGCTGGAGT GGGCGGAAAA GGCCATCGCC
CACTACGAGA AACTCGGCAT CGACCCGCTG AGCAAGACCC TGGTGTTCTC CGACGGGCTC
GACCTGCCCA AGTCGCTACG GCTCTACCGT GCACTTTCCG GACGAATCCA CGTAAGCTTC
GGGGTCGGCA CCAACCTGAC CTGCGACATA CCCGGCGTCG AGCCGATGAA CATCGTGATC
AAGATGATCG CCTGCAACGG CCAGCCCGTG GCGAAGATCT CCGACACACC CGGCAAGACC
CAGTGCCGCG ACGAGAATTT CGTCAGCTAC CTGAAACACG TCTTTCGCGT CACCCAGTGA
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| Protein sequence | MSESIFAERI VQNLLDTDFY KLTMMQAVLH NYPNAEVEWE FRCRSSEDLT PYLAEIRYQI
ERLSELSITA DQLAFLERIP FIKPDFIRFL SLFRFNLRYV HTGIEDGQLS IRLRGPWLHV
ILFEVPLLAI VSEVRNRYRY REVLLEQAAE RLYQKLDWLR AEASEDELAG FQLADFGTRR
RFSYRVQEQA VHILKRDFPG RFVGTSNVHL AREFDLKPIG TMAHEWLMAH QQLGPRLIDS
QIAALDCWVR EYRGQLGIAL TDCITMDAFL ADFDLYFAKL FDGLRHDSGD PLEWAEKAIA
HYEKLGIDPL SKTLVFSDGL DLPKSLRLYR ALSGRIHVSF GVGTNLTCDI PGVEPMNIVI
KMIACNGQPV AKISDTPGKT QCRDENFVSY LKHVFRVTQ
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