| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1404 |
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| Symbol | |
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| ID | 5109693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1567643 |
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| End bp | 1568227 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502633 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001186901 |
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| Protein GI | 146306436 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.778284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.90473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAC TCGTCCTGAT CATGGTCAGC GCCATCCTGG TCAACAATTT CGTGCTGGTG
CAGTTTCTCG GCCTGTGCCC GTTCATGGGC GTGTCGAAGA AGATCGAAAC CGCCATCGGC
CTGTCGCTGG CCACCACCTT CGTGCTGACC CTGGCCGCCA TGTGCAGCTA CCTGGTGCAG
CAGTACGTGC TCAAACCGCT GGACCTGGAA TTCCTGCGCA CCATCAGCTT CATCCTGGTG
ATCGCAGTGA CCGTGCAGTT CACCGAGATG GTGGTGAACA AGACCAGCCC GCTGCTGTAT
CGCGTACTAG GCATCTTCCT GCCGCTGATC ACCACCAACT GCATCGTCCT GGGCGTGGCC
CTGCTCAACG CCAACAAGGC CGAGTTCACC TTCATCACCG CCACCGTCAA CGGTTTCGCC
GCCGGCCTGG GCTTCTCCCT GGTACTGGTG CTGTTCGCCG CCATGCGCGA ACGCATTGCC
ATCGCCGACG TGCCGAAGTC CTTCCAGGGC GCGGCCATCG GCATGATCAC CGCCGGCCTG
ATGTCGCTGG CCTTCATGGG CTTTGCCGGG TTGATCAAGC TATGA
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| Protein sequence | MTELVLIMVS AILVNNFVLV QFLGLCPFMG VSKKIETAIG LSLATTFVLT LAAMCSYLVQ
QYVLKPLDLE FLRTISFILV IAVTVQFTEM VVNKTSPLLY RVLGIFLPLI TTNCIVLGVA
LLNANKAEFT FITATVNGFA AGLGFSLVLV LFAAMRERIA IADVPKSFQG AAIGMITAGL
MSLAFMGFAG LIKL
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