| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1399 |
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| Symbol | |
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| ID | 5109452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1561727 |
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| End bp | 1562434 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502628 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_001186896 |
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| Protein GI | 146306431 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.402341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCT ATCGCGAAAT CAGCTTCAAC GGCCTGTGGA AGAACAACCC GGCGCTGGTG
CAGCTGCTCG GCCTGTGCCC GCTGCTGGGG GTGAGCAACT CCACGGTCAA CGCCCTCGGC
CTGGCCCTGG CCAGCGCGGT GGTGCTGGTG TGCTCCAACA CCGCGGTGTC GCTGGTGCGC
GGCGTGGTCA ACACCGCCGT GCGCCTGCCG GCCTTCGTCA TGATCATCGC CGCGCTGACC
ACCTGCATCG AGCTGCTGAT GCAGGCCTAC ACCTACGAGC TGTACCAGAT CCTCGGCATC
TTCATCCCAT TGATCACCAC CAACTGCGTG ATCCTCGGCC GCGCCGACGG CTTCGCCGCC
AAGCACGACC CGGCCCGCGC CGCCTATGAC GGTCTGATGA TGGGCCTGGG CTTCGGCCTG
GTGCTGGTCA TGATCGGCGC CATCCGCGAA CTGCTCGGCA CTGGTGCACT GTTTGCCAAC
ATGCATCTGC TGTTCGGCCC GATTGCCGCC GAGTGGAAGC TCACCCTGGT ACAGGACTAC
AAGGGCTTCC TGCTGGCCAT CCTGCCGCCG GGCGCCTTCA TCGTTCTCGG GCTGCTGATC
GCCGGCAAGA ACCGCATCGA TCAGATCGCC GCGGAACGGG CCAAGGCCGC CGCGCCCGAG
GCGCCCGCAC AAAGCCGCCG CGTTCGCGTT ACCGGAGTCA TCGAATGA
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| Protein sequence | MTSYREISFN GLWKNNPALV QLLGLCPLLG VSNSTVNALG LALASAVVLV CSNTAVSLVR
GVVNTAVRLP AFVMIIAALT TCIELLMQAY TYELYQILGI FIPLITTNCV ILGRADGFAA
KHDPARAAYD GLMMGLGFGL VLVMIGAIRE LLGTGALFAN MHLLFGPIAA EWKLTLVQDY
KGFLLAILPP GAFIVLGLLI AGKNRIDQIA AERAKAAAPE APAQSRRVRV TGVIE
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