| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1398 |
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| Symbol | |
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| ID | 5109451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1561092 |
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| End bp | 1561730 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502627 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_001186895 |
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| Protein GI | 146306430 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.320797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG CCAAACGCCT GGAAATCTTC CGTCGCCTGC ACGAGGACAA CCCCGAGCCA
AAGACCGAGC TGGCCTACAG CACGCCCTTC GAGCTGCTGG TAGCGGTGAC GCTATCGGCC
CAGGCCACCG ACGTCAGCGT CAACAAGGCC ACGGCCAAGC TGTTTCCGGT GGCCAATACG
CCGGAGGCCA TCTACGCCCT GGGCGTCGAG GGACTTTCCG AGTACATCAA GACCATCGGC
CTGTACAACA GCAAGGCGAA GAACGTCATC GAGGCCTGCC GCATCCTCAT CGAGAAGCAC
GGCAGCCAGG TGCCGGACAA CCGCGAGGAC CTCGAAGCCC TGCCCGGCGT CGGCCGCAAG
ACTGCCAATG TGGTGCTCAA CACCGCTTTC CGTCAGCTGG CCATGGCCGT GGACACGCAC
ATCTTCCGCG TCAGCAACCG CACCGGCATC GCGCCGGGCA AGAACGTGGT CGAGGTGGAG
AAGAAGCTGC TCAAGTTCGT GCCCAAGGAT TATTTGCTCG ACGCCCACCA CTGGCTGATC
CTGCACGGAC GCTACGTCTG CACCGCACGC AAACCACGCT GTGGCGCCTG CCGCATCGAG
GATCTGTGCG AGTACAAGGC CAAGACTTCC GACGATTGA
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| Protein sequence | MNAAKRLEIF RRLHEDNPEP KTELAYSTPF ELLVAVTLSA QATDVSVNKA TAKLFPVANT
PEAIYALGVE GLSEYIKTIG LYNSKAKNVI EACRILIEKH GSQVPDNRED LEALPGVGRK
TANVVLNTAF RQLAMAVDTH IFRVSNRTGI APGKNVVEVE KKLLKFVPKD YLLDAHHWLI
LHGRYVCTAR KPRCGACRIE DLCEYKAKTS DD
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