Gene Pmen_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1395 
Symbol 
ID5109448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1559224 
End bp1559616 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID640502624 
Productlactoylglutathione lyase 
Protein accessionYP_001186892 
Protein GI146306427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.55095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC TGCATACCAT GCTGCGCGTT GGCGATCTGG ACAAGTCCAT CGCCTTCTAC 
ACCGAGGTGC TGGGCATGAC CCTGTTGCGC CGCAAGGACT ACCCGGACGG TCAGTTCACC
CTCGCGTTCG TCGGCTACGG CGACGAGGCG CATAACAGCG TGATCGAGCT GACCCACAAC
TGGGGCGTTG ACAGCTACGA GCTGGGCACC GGCTACGGCC ATATCGCCCT GGAAGTGGAA
GACGTCTACA AGGCCTGCGA GGACATCCGT TCGCGCGGCG GCAAGATCAC CCGCGAGCCA
GGCCCGATGA AGCATGGCAA CAGCATCCTG GCCTTTGTCG AGGACCCGGA CGGCTACAAG
ATCGAGTTGC TCTCGCCCAA GCGAAACGAT TGA
 
Protein sequence
MRLLHTMLRV GDLDKSIAFY TEVLGMTLLR RKDYPDGQFT LAFVGYGDEA HNSVIELTHN 
WGVDSYELGT GYGHIALEVE DVYKACEDIR SRGGKITREP GPMKHGNSIL AFVEDPDGYK
IELLSPKRND