| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1381 |
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| Symbol | |
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| ID | 5109434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1546735 |
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| End bp | 1547424 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502610 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_001186878 |
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| Protein GI | 146306413 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.541157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.225249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG ATCGCATCAA GCTCGAAGCC AGCTGGAAAC ACGCGCTGCG CGAGGAGTTC
GACAAGCCCT ACATGAAGGA GCTGCGCGAG TTCCTGCGGG CGGAGAAGGC CGCCGGCAAG
GAGATCTATC CGCCGGGCCC GCTGATCTTC AACGCCCTCA ATTCCACGCC GCTGGACCAG
GTCAAGGTGG TGATCATCGG CCAGGACCCA TACCACGGGC CGGGTCAGGC GCACGGGTTG
TGCTTCTCGG TGCAGCCGGG CGTGCAGACG CCGCCGTCGC TGGTGAACAT CTACAAGGAA
CTCAAGCGCG ACCTCAATCT CGACATCCCC GCGCACGGCT ACCTGCAGAG CTGGGCCGAT
CAGGGCGTGC TGCTGCTCAA CACCTCGCTG ACGGTGGAGC GCGGCAATGC CGGCTCGCAC
GCGGCCAAGG GCTGGCAGCC GTTCACCGAC CGGGTGATCG AGGTGGTCAG CGAGCATCAG
CCCAAGGTGG TGTTCCTGCT CTGGGGCAGC CACGCGCAGA GCAAGCAGCG TCTGATCGAC
CCGACCAAGC ATCTGGTGCT GCGTTCGCCG CATCCATCGC CGCTGTCCGC CCATCGCGGT
TTCATCGGCA ACGGTCATTT CAGCCGCTGC AACCAGTTCC TCGCACAGAA CGGCATGAGC
CCCATCGACT GGCGTCTGCC GGCGCTATAG
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| Protein sequence | MTEDRIKLEA SWKHALREEF DKPYMKELRE FLRAEKAAGK EIYPPGPLIF NALNSTPLDQ
VKVVIIGQDP YHGPGQAHGL CFSVQPGVQT PPSLVNIYKE LKRDLNLDIP AHGYLQSWAD
QGVLLLNTSL TVERGNAGSH AAKGWQPFTD RVIEVVSEHQ PKVVFLLWGS HAQSKQRLID
PTKHLVLRSP HPSPLSAHRG FIGNGHFSRC NQFLAQNGMS PIDWRLPAL
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