| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1366 |
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| Symbol | |
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| ID | 5109419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1530449 |
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| End bp | 1531510 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502595 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001186863 |
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| Protein GI | 146306398 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.241493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0219132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTC GCTCCCTGCT CACCGCCCTG CTCTGCGCCT GTCTGCTCGG CGCTCCAACG
GCCCAGGCCG CGCCCAAGAC CTTCAAGCTG TGCTGGTCGA TCTTCGCCGG CTGGATGCCA
TGGGGCTATG CCGCCGAACA GGGCATCGTG AAGAAGTGGG CAGACAAGTA CGGCATCGAC
ATTCAGGTGC AGGAAGTGCC GGATTACGTC GGTTCCATCG AGCGCTACAG CGCCGGCCAG
TTCGACGCCT GCACCATGAC CAACATGGAT GCCCTGACCA TTCCCGCCGC CGCCGGCAAG
GACAGCACCG CGCTGATCAT CGGCGACTTC TCCAACGGCG CCGACGGCCT GCTGCTGCGC
GGCAGCGGCC TGCGAATCCA GGACCTCAAG GGCAAGAGCG TGCTGCTGGT GGAGAACTCG
GTGTCGCATT ACCTGCTCAG CCGCGCGCTG GAGTGGGCCC TGCTCGAGGA GAGCGACGTG
ACCATCATCA ACGTCTCCGA CACCGAAATC GCCGAGGCCT TCCTCGCCGG CAAGGGCGAC
GCGGTGATCA CCTGGAACCC GATCCTCTCC GAGATCCGCC GCAAGGCCGA GGTCAGCCAG
GTGTTCAGCT CCAATCTGAT TCCCGGTGAA ATCCTCGACC TCACCGTGGT CGACAGCCAG
ACCCTGGCGC AGCACCCGGA GTTCGGCCGC GCACTGACCG GCGCCTGGTT CGAGACCCAG
CGCCTGCTCG GCCTGCCCAC CCCGGCCGGG CGCGAGGCCC GGGCCAGAAT GGCGGCCGCT
GCCGACACCA CCGCAGAAGA TTTCGAGGCC CAGTTGGGCA CCCTGCGCTC GTTCTACTCG
CCGCGCACCG CGCTGAACTT CGCGCGCACC GGCAAGCTGC CGGATCTGAT GCAACGGGTG
GCGCGCTTCG CCGATGCCCA CGGCCTGCTG GGCAAGAGCG GCTTGGGGCT GACCAATCTG
GGGATCGCCT TTAGCGGCGA ACGGACTTTG GGCAACCCAC AGCGCATCCT GCTGCGTTTC
AATCACGACT ACATGCAGTT GGCCGCCGAC GGCGCACTCT GA
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| Protein sequence | MSIRSLLTAL LCACLLGAPT AQAAPKTFKL CWSIFAGWMP WGYAAEQGIV KKWADKYGID
IQVQEVPDYV GSIERYSAGQ FDACTMTNMD ALTIPAAAGK DSTALIIGDF SNGADGLLLR
GSGLRIQDLK GKSVLLVENS VSHYLLSRAL EWALLEESDV TIINVSDTEI AEAFLAGKGD
AVITWNPILS EIRRKAEVSQ VFSSNLIPGE ILDLTVVDSQ TLAQHPEFGR ALTGAWFETQ
RLLGLPTPAG REARARMAAA ADTTAEDFEA QLGTLRSFYS PRTALNFART GKLPDLMQRV
ARFADAHGLL GKSGLGLTNL GIAFSGERTL GNPQRILLRF NHDYMQLAAD GAL
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