| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1324 |
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| Symbol | |
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| ID | 5109377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1484061 |
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| End bp | 1485617 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502552 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001186821 |
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| Protein GI | 146306356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0640975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.811608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGACG CCAATCTTAA AGCCCAGTTG AAGGCCTACC TGGAGAAGGT CACCCTGCCG
TTCGAGATCG TCGCGTCCCT CGATGACAGC GCGAAATCTC AGGAGCTGCT GGGCCTGCTG
CAAGACATCG TCGGTCTGAC CGACAAGATC ACCCTGAAGA CCGACGGCCG CGATGCCCGC
CGCCCGTCGT TCTCGCTGGT GCGCCCCGGC GCGGATATCG GCCTGACCTT CGCCGGTATT
CCCATGGGCC ACGAGTTCAC CTCGCTGGTG CTGGCGCTGC TGCAGGTTGG TGGCCATCCG
TCCAAGCTGG ATGCCGACAC CATCGCGCAG ATCAAGAGCA TCGAGGGCAA GTTCGAGTTC
GAGACCTACT TCTCGCTCTC CTGCCAGAAC TGCCCGGACG TGGTTCAGGC GCTGAACCTG
ATGGCCGTGC TCAACCCCAA TATCCGCAAC GTCTCCATCG ACGGTGCGCT GTTCCAGGAA
GAAGTCGAGC GTCGCCAGAT CATGGCCGTG CCGAGCATCT ACCTGAACGG TGAGGTGTTC
GCTTCCGGCC GCATGGACGT GAAGGAAATT CTCGCCAAGA TCGACACCGG CGCCGCCAAC
CGCGATGCCG AGAAGATGAG CGCCAAGGAA GCCTTCGACG TGCTGGTGGT CGGCGGTGGC
CCGGCCGGTG CTGCGGCGGC CATCTACGCC GCACGTAAAG GCATCCGCAC CGCGATTGCC
GCCGAGCGCT TCGGTGGTCA GGTGCTGGAC ACCATGGCCA TCGAGAACTT CATCTCGGTC
AAGGAGACCG AAGGCCCGAA ACTGGTGCGC GCGCTGGAAG AACACGTCAA GGAATACGAA
GTCGACGTGA TGAACCTGCA GCGTGCCTCG GCCCTGGTGC CGGCCAGCAG TGAAGGCGGC
CTGCACGAAG TGAAGTTCGA GAACGGCGCC TCGCTCAAGG CCAAGACCGT GATCCTCTCT
ACCGGCGCGC GCTGGCGTGA GATGGGCGTG CCCGGCGAGC AGGAGTACAA GGCCAAGGGC
GTGTGCTTCT GCCCGCACTG CGATGGCCCG CTGTTCAAGG GCAAGCGCGT GGCGGTGATC
GGTGGCGGCA ACTCCGGCGT CGAGGCGGCC ATCGACCTGG CCGGCATCGT CGCCCACGTC
ACCCTGCTGG AATTCGCCGA TACCCTGCGC GCCGACGCCG TGCTGCAGAA GAAGCTGTTC
AGCCTGCCCA ACGTGACCGT GATCAAGAGC GCGCAGACCA CCGAGGTCAC TGGCGACGGT
CAGAAGGTCA ACGGCCTGGT GTACAAGGAC CGCACCACCG AGGAGCTGCA TCGCGTCGAG
CTGGAAGGCA TCTTCGTGCA GATCGGTCTG CTGCCCAACA GCGACTGGCT CAAGGGCACC
GTCGAGCTCA GCCGCTTCGG CGAGATCGTC GTCGATGCCA AGGGCGCGAC CAACATCCCC
GGCGTGTTCG CTGCCGGTGA CGTGACCACC GTGCCGTACA AGCAGATCGT CATCGCCATG
GGCGAGGGCT CGAAGGCATC GCTGAGCGCC TTCGACCACC TGATCCGCCA CAGCTGA
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| Protein sequence | MLDANLKAQL KAYLEKVTLP FEIVASLDDS AKSQELLGLL QDIVGLTDKI TLKTDGRDAR
RPSFSLVRPG ADIGLTFAGI PMGHEFTSLV LALLQVGGHP SKLDADTIAQ IKSIEGKFEF
ETYFSLSCQN CPDVVQALNL MAVLNPNIRN VSIDGALFQE EVERRQIMAV PSIYLNGEVF
ASGRMDVKEI LAKIDTGAAN RDAEKMSAKE AFDVLVVGGG PAGAAAAIYA ARKGIRTAIA
AERFGGQVLD TMAIENFISV KETEGPKLVR ALEEHVKEYE VDVMNLQRAS ALVPASSEGG
LHEVKFENGA SLKAKTVILS TGARWREMGV PGEQEYKAKG VCFCPHCDGP LFKGKRVAVI
GGGNSGVEAA IDLAGIVAHV TLLEFADTLR ADAVLQKKLF SLPNVTVIKS AQTTEVTGDG
QKVNGLVYKD RTTEELHRVE LEGIFVQIGL LPNSDWLKGT VELSRFGEIV VDAKGATNIP
GVFAAGDVTT VPYKQIVIAM GEGSKASLSA FDHLIRHS
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