Gene Pmen_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1317 
Symbol 
ID5109133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1477009 
End bp1477329 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content66% 
IMG OID640502545 
ProductXRE family transcriptional regulator 
Protein accessionYP_001186814 
Protein GI146306349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000865545 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGC AAATCATTTC CCGCGATGGC GAACCGGAAT ATGCCGTGTT GCCCTGGGGC 
GAATATCAGG CATTGATGCA GGCGGCCGGG CGCCAGGAGC ATGCCGAGCC CGCTGCTGCG
CAGCCGGTCG ATGCGCTGAA GCCTTCGCTC GAGCAACTGC AAGCGCTGCG TGAGGCCAAG
GGCTTGAGCC CGGAGGCTCT GGCCCGCAGC GTGGGCATCA GTCCGCATTA CCTGGCCATG
ATCGAGCGTG GCGAGCGCCG ACCCGACGCG GCCATCCTGC GTTCGCTGGC CTGGACCCTG
GGGCTGGAGG GCTGGTCTTG A
 
Protein sequence
MTVQIISRDG EPEYAVLPWG EYQALMQAAG RQEHAEPAAA QPVDALKPSL EQLQALREAK 
GLSPEALARS VGISPHYLAM IERGERRPDA AILRSLAWTL GLEGWS